Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1393 ATGGACACCATTAGCACAAGTAGCACTAATTCAATCATTAGTTCTCTTCAACAAACACCAACAAAAATAACCAAATCCAAGAAGAAAAAGAACAAACCCATCAAGGTAGTTTATATATCCAACCCTATGAAGGTTACCACCAGTGCCTCTGAATTTAGGGCACTGGTCCAAGAACTCACTGGTCAGTATGCTGAATCGCCGCCGGATCCTTCTAGGTATCAGGACTTCAGCGGCGATGATAGCAGTGCTGACGGTGGATGCAGTGAGAATAGAATTGATTGTGATAAAAATGATCATACGGTTGTTGTTGTGCCACCACTTGTGGATCCTGATGATGATAAAGTGAAACCTAGTGAGAGTTTTGAGGGTTTTGATGAAGATGTACTTTTGATGCCTCAGATGGTGGAGAACATTTGGGATCTGCTTCCAACAAGTGCATTCTATGAATCTTTTCAACTTGATAGCTATTGA 471 0.4119 MDTISTSSTNSIISSLQQTPTKITKSKKKKNKPIKVVYISNPMKVTTSASEFRALVQELTGQYAESPPDPSRYQDFSGDDSSADGGCSENRIDCDKNDHTVVVVPPLVDPDDDKVKPSESFEGFDEDVLLMPQMVENIWDLLPTSAFYESFQLDSY* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1393 156 MobiDBLite consensus disorder prediction 61 85 - -
Tpr6g1393 156 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g1393 156 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 150 - -
Tpr6g1393 156 MobiDBLite consensus disorder prediction 1 31 - -
Tpr6g1393 156 Pfam VQ motif 39 64 IPR008889 -
Tpr6g1393 156 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 150 IPR039335 GO:0051091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1393 Tpr-Chr6 14975059 14975870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1393 - - mtr:MTR_7g089860 181.415