Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1387 ATGGCAATCCTTAAAATAAGCAAAAAACATCACAAACGTTTCAACAATCCTTTCCCTTCTGCACCAACAACTCTCCCTAATGTCCAAGGCTCATTATTCATCAATTCCAAAGCTTTATCTTCACAAGATCAAACCTTTTCAATTGGCAATGATTTTCAACTTTTTTGGTCCAATATCAATGGTGGGCACCTTTCAATTTCACATCTTTCTCAGAAAAACAGACCCATTTGGTCAACAATCTCAGGAAAAGCTTTTGTTTCAGCTGCAGTGGTTGACACAGAGATTGAAGAAAGTAGAGGTTCTTTTCTTGTTAAAGATAAAGATGTTCATGTGATTTGTAATCATCAAACTATTGATGATATTAGGATTATTGATCAATTTGGTGATCATTTGGAATATGAAGTTGAAGATTTGGATCAGAAAAGTTATGCAGAAGAGATAAAGTTACCTACTTTGTTGATCACAGGAAGGCTTTTCAATATGAGTAAGAAGAGTAAAAGGTTTCAAAAATATGGAATTCAAGGAAATATACAGTTTGAATCAAAAGGGCCATTTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAAATAAGCATGAAGTTGGTTTTCAAGTGAAGATTGAGAAACTCAACTTTAGTTCAAGCAATAAGGTGTCTTCAGAAGGTTCTGGAATTTACAATGGTTTCAAGAAGAGGTTGAGTAATAGAAAAAAGAGGTTAGGTTGGTGTTGGTATCTTTCAAGGCCAAGAGGTTTTGTTTTGGTTTCGTCGGTTGAGGATGAAATAGGAGACATGAAAATACCTAAACCAAAAGAATTCAATAGGGTTTGGTTGACATATGAAAGTGATGAGAATGAAAGGTTTTATGGTTTTGGAGAGCAGTTTTCTCACATGAATTTTAAGGGCAAAAGGGTGCCTATCTTAGTTCAAGAACAAGGTATTGGAAGAGGAGATCAACCTATCACTTTAGCTGCTAACTTGGTTAGTTACAGGGCAGGAGGTGATTGGAGTACAACATATGCTCCTTCTCCATTCTACATGACATCAAAAATGAGGTCTCTTTACCTTGAAGGATATGATTATACCGTCTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATATATGGAAACTCGGTTGAAGGACGGATATTGCATGGGAACACACCTTGTGAGCTGATTGAACATTTCACAGAAACCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCTGGTGCTATAGTTGGAATGCAGGGTGGCACTGATGCTGTACGTCGTATTTGGGATGAATTAAGAACTTATGACGTTCCTGTCTCAGCATTTTGGTTACAGGATTGGGTAGGGCAGAGAGAAACAATGATTGGCTCACAACTTTGGTGGAATTGGGAAGTGGATGACCAAAGATATTGGGGTTGGAAGGAACTTATCAAAGATCTTAGAACTCGAAATATAAAAGTTATGACATATTGCAATCCCTGTCTCGCTCCGGTTGATGAGAAGCATAACAAAAAGAGAAACCTTTTTGAGGAGGCAAAACAATTGGACATATTGGTGAAAGACGGTAATGGCAATCCGTACATGGTTCCCAATACTGCCTTTGATGTGGGAATGCTGGATCTAACTCACCCAAAAACTACAACTTGGTTCAAGCAGATTCTACTTGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTCGGCGAAGGCCTGCCCGTTGACGCCGTTCTATATTCAGGTGAAGATCCTATTTTAGCTCATAACAGATATCCAGAACTATGGGCCAAAATCAACAGAGAAATTGTGGAAGAATGGAAAAGTAAGTCCTTGGACAAGTCGAAGGAAGACGAAGAAGATGGCTTGGTTTTCTTCATGAGGGCTGGATTTAGAGATAGTCCTAAGTGGGGGATGCTATTTTGGGAAGGAGATCAAATGGTCAGTTGGCAAGCAAATGATGGAATAAAGAGTTCTGTTGTTGGCTTACTTAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGTTATTGTACAGTTAACTTACCTATTGTTAAATACCGAAGAAGTCAAGAATTGCTTTTGCGTTGGATGGAGCTTAATTCTTTCACCACGGTCTTCCGCACTCACGAAGGAAACAAACCATCATGCAATAGTCAGTTTTACTCAAATGAACAAACACTGTCACACTTTGCGCGCTCCGCAAAAATATACACAGCATGGAAATTTTACCGAATGCAACTAGTGAAGGAAGCAGCACAGAAAGGATTGCCTGTATGCCGGCACCTATTTCTCCATTACCCTAATGATGAACATGTGCATAACTTTAGTTATCAACAGTTCTTGGTTGGTTCTGAGTTCCTAGTGGTTCCTGTTCTTGACAAAGGAAAGAAGAAAGTTAAAGCTTATTTTCCATTGGGAGAGAGTAGTAGTTGGCTACATATTTGGACAGGAAAAATATTTTCCAAACAAGGAAGTGAGTCATGGATAGAAGCTCCGATAGGTTATCCTTGTGTGTTTATTAAGGTTGGTTCCATTATTGGAGAAACCTTTTTGAGTAACCTAAAAAATTTAGGAATTCTTTAA 2607 0.3859 MAILKISKKHHKRFNNPFPSAPTTLPNVQGSLFINSKALSSQDQTFSIGNDFQLFWSNINGGHLSISHLSQKNRPIWSTISGKAFVSAAVVDTEIEESRGSFLVKDKDVHVICNHQTIDDIRIIDQFGDHLEYEVEDLDQKSYAEEIKLPTLLITGRLFNMSKKSKRFQKYGIQGNIQFESKGPFVYARYWVLFNQKNKHEVGFQVKIEKLNFSSSNKVSSEGSGIYNGFKKRLSNRKKRLGWCWYLSRPRGFVLVSSVEDEIGDMKIPKPKEFNRVWLTYESDENERFYGFGEQFSHMNFKGKRVPILVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPFYMTSKMRSLYLEGYDYTVFDLTRLDRVQIQIYGNSVEGRILHGNTPCELIEHFTETIGRLPELPEWIISGAIVGMQGGTDAVRRIWDELRTYDVPVSAFWLQDWVGQRETMIGSQLWWNWEVDDQRYWGWKELIKDLRTRNIKVMTYCNPCLAPVDEKHNKKRNLFEEAKQLDILVKDGNGNPYMVPNTAFDVGMLDLTHPKTTTWFKQILLEMVDDGVRGWMADFGEGLPVDAVLYSGEDPILAHNRYPELWAKINREIVEEWKSKSLDKSKEDEEDGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSQELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNEQTLSHFARSAKIYTAWKFYRMQLVKEAAQKGLPVCRHLFLHYPNDEHVHNFSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKIFSKQGSESWIEAPIGYPCVFIKVGSIIGETFLSNLKNLGIL* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1387 868 SUPERFAMILY (Trans)glycosidases 395 763 IPR017853 -
Tpr6g1387 868 CDD GH31_glucosidase_YihQ 404 742 IPR044112 -
Tpr6g1387 868 Gene3D glycosyl hydrolase (family 31) 187 388 - -
Tpr6g1387 868 Pfam Glycosyl hydrolases family 31 387 854 IPR000322 GO:0004553|GO:0005975
Tpr6g1387 868 Gene3D - 768 854 IPR013780 -
Tpr6g1387 868 PANTHER SULFOQUINOVOSIDASE 27 867 - -
Tpr6g1387 868 CDD GH31_N 274 404 - -
Tpr6g1387 868 SUPERFAMILY Galactose mutarotase-like 248 392 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tpr6g1387 868 SUPERFAMILY Glycosyl hydrolase domain 765 849 - -
Tpr6g1387 868 Gene3D Glycosidases 393 767 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1387 341 854 Glycoside Hydrolase AT1G68560 23.156 1.24e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1387 - - gmx:100779005 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1387 6 14917369 14922157 Tpr6g1387 6 14917369 14922157 ECH