Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1381 ATGCTTTATTACTTTCTTATATCTTTTGTTTCCTTTGTTATGATCCTTTCAAAATCTTTTACAAATGTGTTTTTTGAAAAGCTTTTAAGTTTTCTAGCTTCTAGGTTCAAAATAAGAACTAGTTTTTTTCAATTTTTTCTTGGCATGCAATTATCAAACAAGAGTTTAGCTTCAAAATTTGAGCATGGAGAAGAAGAGGTAGAGAAAGTTTCTCTCTTGGATTTGCATGATTTACCATTAGATTGTATACTTGAAAAACTTTCACCAAGTGAATTATGCAATGTGGCAAAAGTGTGTAAATCTCTTAGAAAAAAATGTAGAAGTGATTATTTATGGGAGAAACATATGAAGATTAAATGGAGTAAAGTTTTTGGTGATGCTGCTTATAGAGAATGGAAATGTTATGTAGCTTCAAGAAACATAGACAAGAGTTCAAATCAACACAAAAATCAGAAAACAATACTTGATTTTCTTCATGGTTTTGTTCCTTTTTTTTGGATTAAATCAAAATCAGAAAATTATATCAAGTCAAGGCTAGATGATTCAATTGCTGCACTTTATCTTTCTCTTGAGAATGGAAAATTTTGGTTCCCTGCTCAAGTTTATAACCGTGAGAATGGACATGCTGGATTCATGCTTTCATGTTATGATGCTCAACTTTGCTATGACTCTAGAATAGATACTTTTCAAGCAAGGTATTCACCTAATGGGAGATGGACAATTGAGGAAAACATAAAATGGGAGAGGCTAAGAGTGCCACCTATTGATTCTCCTTCACATGTTCTTCATATTTCTGATTGCTTAGATGATTTAAGGCCTGGAGATCATGTTGAAATTCAATGGAGAAGAAACAAGGAATTCCCTTATGGTTGGTGGTATAGTATCATTGGTCATTTGGAAACATGTCAAGAGCAAGGGAACCATTGCCAATGTCACAATAAAGATACAGTGATTTTGGAGTTCACACAATACACAGTTGGTTCAAGATGGAGACAAACAATGATAAACAGAAAGAATCATAGAGAACAAGGAAATGAAATAGAAGGTTTCTATGGAGGAATTAGAAAGTTGCATAGCAAAGAGGAAATTACAAGGTGGAAGAAACTTTGGCCAACAAAAACTGTGGAATAG 1131 0.3307 MLYYFLISFVSFVMILSKSFTNVFFEKLLSFLASRFKIRTSFFQFFLGMQLSNKSLASKFEHGEEEVEKVSLLDLHDLPLDCILEKLSPSELCNVAKVCKSLRKKCRSDYLWEKHMKIKWSKVFGDAAYREWKCYVASRNIDKSSNQHKNQKTILDFLHGFVPFFWIKSKSENYIKSRLDDSIAALYLSLENGKFWFPAQVYNRENGHAGFMLSCYDAQLCYDSRIDTFQARYSPNGRWTIEENIKWERLRVPPIDSPSHVLHISDCLDDLRPGDHVEIQWRRNKEFPYGWWYSIIGHLETCQEQGNHCQCHNKDTVILEFTQYTVGSRWRQTMINRKNHREQGNEIEGFYGGIRKLHSKEEITRWKKLWPTKTVE* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1381 376 Gene3D - 64 149 - -
Tpr6g1381 376 Pfam F-box domain 74 114 IPR001810 GO:0005515
Tpr6g1381 376 ProSiteProfiles F-box domain profile. 69 115 IPR001810 GO:0005515
Tpr6g1381 376 SUPERFAMILY F-box domain 75 332 IPR036047 GO:0005515
Tpr6g1381 376 SMART fbox_2 78 115 IPR001810 GO:0005515
Tpr6g1381 376 PANTHER ESTS AU081301(E20138) 3 375 - -
Tpr6g1381 376 PANTHER F-BOX-LIKE PROTEIN 3 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1381 Tpr-Chr6 14827471 14831389 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1381 - - gmx:100778469 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1381 6 14827471 14831389 Tpr6g1381 6 14827471 14831389 ECH