Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1380 ATGATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTTACAAGGGCTTTCGTCATCGCCTCAGCGCTTTTCTCAATTTTCTTTGGGATCCAAGGTCGTTTCAACACTCTAGGATTATCTTATCAGGATATTTTTGGGAAGCTTCGCATATGGAAGTTGATTATGTTCATATTTTCCTTCACATCAACACCAGAGTTGATGTTTGGACTATATCTGCTATATTACTTCAGGGTATTTGAGAGACAAATTGGTTCCAATAAATGCTCAGTGTTTATTGTGTTCTCCATATTAACTTCACTTCTGTTTGAAGTATTTGCTGTTGCACTTTTAAAAGATCCTTCAGCAATCCTAGTCACTCCTGGACCTTACGGCCTTATATTTGCTTCGTTTGTACCCTTTTTCTTTGACATTCCCGTTTCAACACGATTCCGTATGTTTGGTTTCAACTTCTCTGATAAGTCAATCATATATGTAGCTGGACTTCAGCTTCTACTGTCACATTGGAAAAGCTCCGTCTTACCAGGGATATGTGGCATCCTTGCTGGTTCCTTATACCGTTTGAATGTCTTTTATATCCGCAAAGCAAAGTTCCCGGAGTTTATTTCATCGTTCTTTTCACGAATTTCCTTGCCATCCATCGGGGCTCCACGCACAACACCAACAAGGAATGTTATGGGCAATGTACCATCTTTCCCAGGTCGCCAAATGGAGAGAAACTATCCAGCTCCAATGCATTCTGCAGTACAACCATCAGAGGACTCAATTGCAACCCTTGTTTCAATGGGATTTGACAGGAATTCTGCTCAACAAGCCCTAGTGCAGGCCAGAAATGACGTGAATGTGGCAACAAACATCCTACTGGAGGCACAGGCCCACTAA 882 0.4218 MMNGGPSGFTNAPVTRAFVIASALFSIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMFIFSFTSTPELMFGLYLLYYFRVFERQIGSNKCSVFIVFSILTSLLFEVFAVALLKDPSAILVTPGPYGLIFASFVPFFFDIPVSTRFRMFGFNFSDKSIIYVAGLQLLLSHWKSSVLPGICGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSIGAPRTTPTRNVMGNVPSFPGRQMERNYPAPMHSAVQPSEDSIATLVSMGFDRNSAQQALVQARNDVNVATNILLEAQAH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1380 293 Pfam Rhomboid family 50 190 IPR022764 GO:0004252|GO:0016021
Tpr6g1380 293 Pfam UBA/TS-N domain 252 287 IPR015940 -
Tpr6g1380 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 250 290 IPR015940 -
Tpr6g1380 293 SUPERFAMILY Rhomboid-like 10 195 IPR035952 -
Tpr6g1380 293 SUPERFAMILY UBA-like 246 290 IPR009060 GO:0005515
Tpr6g1380 293 SMART uba_6 252 289 IPR015940 -
Tpr6g1380 293 Gene3D - 234 292 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1380 K25216 - gmx:100805217 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1380 6 14816433 14824702 Tpr6g1380 6 14816433 14824702 ECH