Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1374 ATGATAAGTGCTTTAGACTTATACCATGTCCTTACAGCAGTAGTACCACTCTATGTAGCTATGATCCTTGCTTATGGTTCAGTAAAATGGTGGAAAATCTTCACACCAGATCAATGTTCTGGTATAAACCGTTTTGTAGCACTTTTTGCAGTTCCACTTCTCTCATTTCACTTCATTTCAACCAACAATCCATACACTATGAACTACAAATTCATAGCAGCTGATTCACTTCAAAAATCAATCATCTTAATACTCCTTTTCATTTGGTCAAGAGCAAGCTCAAGAGGTTCATTAGAATGGTCTATAACACTTTTCTCACTTTCAACACTTCCAAACACACTTGTTATGGGTATACCTTTGTTAAAAGGAATGTATGGTGATGATTCTGGTACTCTTATGGTTCAAATCGTTGTTCTTCAATGTATCATTTGGTATACATTGATGTTGTTTTTGTTTGAGTATAGAGGTGCAAGGATTCTGATAGGTGAACAGTTTCCTGATACTGCTGGTTCTATAATCTCTTTCAAAGTTGATTCTGATGTTCTTTCTTTGGATGGTAAAGAGCCTCTTCAAACTGAAGCTGAAGTTGGTGAAGATGGTAAACTTCATGTGAAAGTTAGAAAATCAACAAGTTCAAGAAGTGAGATTTTTTCTAGACCTTCTCATGGTGGTGTTTCTTTAACACCAAGACCTTCAAATTTAACAAATGCTGAGATTTATTCACTTCAATCTTCAAGAAATCCTACACCAAGAGGGTCTAGTTTTAATCATTCAGATTTTTACTCTATGGTTAATGGAAGAAATGTTAGTCCAAGACAATCTAATTTTGGAAGTTTAGGTTTTGATGAAGAAAGTGGGGTTGGTAAAGTTAATGGAGGTGCAAATAGTGGAAATGGGTACCCTACACCTCATAATGCTGGGATTTTTTCACCTGTGGCTAATAAGAAAAAGGGTCATGGTGGTGGTGATGGAAAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGAAGGTGGAATTCATGTCTTTAGAGGTGGTGGTGATTATGGAAATGATCAACTTAATGGAGTAGCTCACCAAAAAGATTATGAAGAATTTGGTCATGATGAATTTAGCTTCGGAAACAGAACTGTTGCCAATGGTGTGGAAAAAGAAGGACCAGTGCTTTCAAAGCTTGGTTCAAGTTCAACTACTGAGCTTCATCCTAAAGCTAGTTCTCAAGGTGAATCTAAGCCAACAAACATGCCACCAGCTAGTGTTATGACAAGGCTAATCTTGATTATGGTTTGGAGAAAATTGATTAGGAATCCTAATACTTATTCTAGTCTTATTGGTCTCATTTGGTCTTTGGTCTGTTTCAGGTGGAATGTTGTTATGCCTGCTATTGTTGCTAAATCAATTGCAATTTTATCTGATGCTGGCCTTGGAATGGCTATGTTTAGTCTTGGCTTGTTCATGGCATTGCAACCGAGGATTATTGCGTGTGGAAACACGGTTGCTTCATTTGCTATGGCGGTTCGTTTCCTTGTCGGCCCTGTGGTGATGGCTGCTTCGTCGCTTATTGTAGGACTCAGGGGAGTTCTGTTGCACATTGCTATTGTACAGGCTGCACTTCCCCAAGGAATTGTTCCCTTTGTGTTTGCCAAGGAATACAGTGTTCATCCTGACATTCTTAGCACTGGGGTTATATTTGGAATGTTAATTGCTCTTCCTATAACATTGGTTTACTACATTTTGTTGGGACTTTGA 1761 0.3805 MISALDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNYKFIAADSLQKSIILILLFIWSRASSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDDSGTLMVQIVVLQCIIWYTLMLFLFEYRGARILIGEQFPDTAGSIISFKVDSDVLSLDGKEPLQTEAEVGEDGKLHVKVRKSTSSRSEIFSRPSHGGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHSDFYSMVNGRNVSPRQSNFGSLGFDEESGVGKVNGGANSGNGYPTPHNAGIFSPVANKKKGHGGGDGKDLHMFVWSSSASPVSEGGIHVFRGGGDYGNDQLNGVAHQKDYEEFGHDEFSFGNRTVANGVEKEGPVLSKLGSSSTTELHPKASSQGESKPTNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNVVMPAIVAKSIAILSDAGLGMAMFSLGLFMALQPRIIACGNTVASFAMAVRFLVGPVVMAASSLIVGLRGVLLHIAIVQAALPQGIVPFVFAKEYSVHPDILSTGVIFGMLIALPITLVYYILLGL* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1374 586 MobiDBLite consensus disorder prediction 396 419 - -
Tpr6g1374 586 TIGRFAM 2a69: auxin efflux carrier 1 586 IPR014024 -
Tpr6g1374 586 Pfam Membrane transport protein 9 581 IPR004776 GO:0016021|GO:0055085
Tpr6g1374 586 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 586 - -
Tpr6g1374 586 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1374 Tpr-Chr6 14731110 14734063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1374 1 577 Organic Solute Cotransporters AT1G73590 63.365 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1374 K13947 - gmx:100820506 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1374 6 14731110 14734063 Tpr6g1374 6 14731110 14734063 ECH