Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1373 ATGCACAAAATTGTTCAAAGGGTGCGATTCTTCAATCGTTCATCACTTCTAACACACTCACACTTCGACCAATCTCAACTTGTTTCCGCCTTTTCAAACTCAGTTACAATGGATCAAACTCGCACTGTTCAATTTCTTCATTTTCGGGAAATTACAAACACAAGAGAACTTAGGAATGCATTTGACAAATACGATAAAAACGTTTTGTCTCGATGCCTGAACTGGACTTCGAGGGAAAATGATAATCATCATGCTGCCAGCTATGTGGTAAACCATCATTTTACAGCTGATCACAATGATAGATGCAGAAAGGAGTTCTCAAGTAAGCTTCTTAAAAATATTCCAGACTTTGTTAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCCACTGATGTGAAAACTAAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCCGTTGTTGAGGCGACGAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCAGATGCAAAGGATGTATTGGCAGCAATCCGAGACGTTGAAGGTGCTAGCTTTCCTGTCTTAACTCCAAATCTCAAAGGTTTTGAGGCAGCTGTTGCCGCTGGTGCTAAGGAAGTGGCTGTTTTTCCTGCTGCTTCTGAATCATTCTCTAAAGCCAATCTCAATTGTGGCATTGAGGATAACCTTGCTCGTTGCCGTGACATTGCTTCAGCTTCTAGAAGCCTCTCGATCCCAGTTCGTGGATACATATCATGTGTTGTGGGATGTCCTCTGGAAGGGAAAATTTCTCCAGCAAAAGTAGCATACGTTGCAAAATCACTTTATGAGATGGGGATCTCTGAGATTTCATTAGGGGATACAATTGGTGTTGGTACACCGGGTACCGTCATTCCTATGCTTGAAGCTGTTCTTGATGTTGTTCCAGTTGACAAGCTTGCTGTCCACTTTCATGATACTTACGGTCAAGCACTTTCAAATATTCTAATTTCACTTCAGATGGGGATCAGCACAGTGGATTCATCAGTCTCTGGTCTTGGAGGTTGTCCATATGCAAAAGGTGCAACTGGGAATGTTGCCACTGAGGATGTTGTTTATATGCTGAATGGACTTGGAGTTAAAACTAATGTGGACCTTGGTAAACTTATGCTTGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCATCTGGTTCAAAAGCTGCAACTGCATTGAATAAAGTTACAAATAATGCTTCCAAACTGTGA 1254 0.4179 MHKIVQRVRFFNRSSLLTHSHFDQSQLVSAFSNSVTMDQTRTVQFLHFREITNTRELRNAFDKYDKNVLSRCLNWTSRENDNHHAASYVVNHHFTADHNDRCRKEFSSKLLKNIPDFVKIVEVGARDGLQNEKVIVPTDVKTKLIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIRDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASRSLSIPVRGYISCVVGCPLEGKISPAKVAYVAKSLYEMGISEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATALNKVTNNASKL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1373 417 Pfam HMGL-like 118 390 IPR000891 GO:0003824
Tpr6g1373 417 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 36 417 IPR043594 GO:0016833
Tpr6g1373 417 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 36 417 - -
Tpr6g1373 417 Gene3D Aldolase class I 111 410 IPR013785 -
Tpr6g1373 417 CDD DRE_TIM_HMGL 120 393 - -
Tpr6g1373 417 ProSiteProfiles Pyruvate carboxyltransferase domain. 118 385 IPR000891 GO:0003824
Tpr6g1373 417 SUPERFAMILY Aldolase 113 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1373 Tpr-Chr6 14713890 14719874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1373 K01640 - gmx:100801507 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1373 6 14713890 14719874 Tpr6g1373 6 14713890 14719874 ECH