Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1357 ATGGTAACAATGATGAATGTTTGTGAAAAAAAACAAATTGATTTCAAGTCGTTAGGAAGAGGGGAGACAAATGAGTCAGCAGACGCGGCCTTTTTCACCATGACAAAGATTAGTCCCGAAATTGAGACCAAGATGCCAATGGAAGCAGTTCCGCCTGTTTCAGCCGATGTGAGCTTTATTTCAAATAGTTTTCCAAAGTATAAACTAGGAGCCGATCATCAAGTTTTTCAAGAGCCTACTGCGGATAACAACGGTCCTTCTTTGAAAGATGTTATTGAACAAGAAGCTTCCAATTTATCAGACCAGAACAAGCGTATCTCAGTTCGCGACCTTGCTAGTAAATTTGACAAGAACTTGTCTGCAGCTGCTAAGCTATCGAATGAGGCAAAGCTAAGAGAGGTGCCATCGTTGGAGGGACACGTTCTTTTGAAGAAACTAAGGGATGCGTTAGAATCTTTGAAAGGCCGTTTTACGGGAAGAAATAAAGAGGATGTGGAGAAAGCTATCTCTATGGTGGAAGCTTTAGCTGTTAAGTTGACTCAGAGTGAAGGAGAACTGATTCAAGAGAAGTTTGAAGTGAAAAAGCTTGTGAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGCTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCCGAAATCGAGAGTGCTAGAGCAGTGGTGCTGAGAATCGGGGAAGCACTTGAGGAACAAGAAAAAGCTACACTAGCTTCTCAACCACAGAATGTGGATGGACTAGTAGAAGAGGTTCAAGAGGGTAGAAGAATCAGATTGCTGCATCAGCCAAGCAAGGTAATGGCTATGGAACATGAACTTCGTGCTTTAAGGGATCAAATTCAAGAAAAATCGATATTTTCAATTCAGCTTCAGAAACAGCTAACAATGAGCAAATGGGACAAGGAGAATAAATCTCATTCATATAAGTTAGATGGTTCTGAAGCTTTAGGTTCATATCTGCAAGTCAAGCCTTGCTCAATTGAAGTACCACAGGTTTCAAAATGTTCGTTTCAGTGGTATCGCTTATCATCTGAAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAGCAAATCAATGTATTCTCCCGATCCCCTTGATGTTGGGAGAATGTTACAAGTGGACATTGTCTCCGATGGAAAAAAACTTACACTAACAACTAATCCGATTCAAACTGTTCCAGGACTTGGAAGTCACATGGAGACACTTCTCCGAAAATCCAATACTGATTTTAGTGTAGTTATTTCTCAGATGAATGGAAAAGATCACTCGTCACATTCGACTCATTCATTTAATGTGGGAAGAATGAGGATAAAACTATGCAGGGGTTGGATTACAAAAGCTAGAGAGATTTACTCACCAACAATGCAGCTATGTGGAGTCAGAAGTGACGTCGGCAATGCAGCGAAGGCACTATTTTGGCAAGCAAGAAAAGGGCTCTCATTTGTGTTAACATTTGAATCAGAGAAAGATAGAAATGTCGCCATTATGATCGCCAGGAAACACGCTCTCGATTGCAATGTTGTGCTTGCTGGACCAGATGATCTAGTGTAG 1572 0.4116 MVTMMNVCEKKQIDFKSLGRGETNESADAAFFTMTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQEPTADNNGPSLKDVIEQEASNLSDQNKRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALESLKGRFTGRNKEDVEKAISMVEALAVKLTQSEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACAEIESARAVVLRIGEALEEQEKATLASQPQNVDGLVEEVQEGRRIRLLHQPSKVMAMEHELRALRDQIQEKSIFSIQLQKQLTMSKWDKENKSHSYKLDGSEALGSYLQVKPCSIEVPQVSKCSFQWYRLSSEGSWREVISGASKSMYSPDPLDVGRMLQVDIVSDGKKLTLTTNPIQTVPGLGSHMETLLRKSNTDFSVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPTMQLCGVRSDVGNAAKALFWQARKGLSFVLTFESEKDRNVAIMIARKHALDCNVVLAGPDDLV* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1357 523 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 34 521 - -
Tpr6g1357 523 Pfam PH domain of plant-specific actin-binding protein 414 521 IPR041144 -
Tpr6g1357 523 Gene3D - 302 398 - -
Tpr6g1357 523 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 34 521 IPR039640 GO:0003779|GO:0007015|GO:0010119
Tpr6g1357 523 Gene3D - 399 523 - -
Tpr6g1357 523 Gene3D - 134 185 - -
Tpr6g1357 523 Pfam Ig domain of plant-specific actin-binding protein 315 411 - -
Tpr6g1357 523 Pfam Coiled-coil regions of plant-specific actin-binding protein 136 301 IPR032009 -
Tpr6g1357 523 Pfam Actin-binding domain of plant-specific actin-binding protein 88 130 IPR032012 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1357 Tpr-Chr6 14445647 14450671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1357 - - gmx:100798320 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1357 6 14445647 14450671 Tpr6g1357 6 14445647 14450671 ECH