LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g1343	ATGTTAGATATTGAGGAAGAGAGTGGCATGAGAGGGAATGGAGAGATGGAAAAGGAAAAGAGCAAACAGAAGCAAAGAGGAGGCATCAGAACATTACCTTTCATCCTTGCGAATGAAGTGTGTGATAGATTTGCGAGCGCTGGTTTTCATGCAAACATGATAAGCTATCTTACACAACAATTGAACATGCCAATGGTTAAAGCTTCCATCACTCTTAGCAACTTTAGTGGACTATCTAGCTTGACTCCTCTTCTTGGTGCTTTCGTTGCTGATTCTTTCGCTGGCCGATTTTGGACTATTGTTGTTGCAACTCTCATCTATGAACTGGGACTAATTACTATAACAACATCAGCCATAGTGCCCCATTTTCACCCTCCACCATGTCCAACACAAATGCATTGTCAAGAACCAAAATCCTCACATCTATGGATACTCTATCTAGCACTTTTTCTCACATCTTTAGGATCAGGTGGTATTAGATCATGTGTTGTACCCTTTTCAGGAGATCAATTTGACATGACTAAAAAAGGTGTTGAATCAAGAAAATGGAATCTCTTCAATTGGTATTTTTTTTGTACTGGATTGGCTTCACTAAGTGCTTTGACAATTGTGGTTTATATTCAAGATCATATGGGTTGGGGTTGGGGACTTGGTATTCCAACCATTGCAATGTTTATATCACTAATTGCTTTTGTTTTGGGATCAAGACTTTATAAGACTTTTAAGCCAAATGGAAGCCCGTTTGTGAGATTAGCACAAGTGATTGTGGCAGCTGTGAAAAAGAGGAATGAGGTTTTGCCACAAGATCCTAAGCTTTTATACCAAAATATGGAGCTTGATTCTCCTATATCTTTGGAAGGAAGGCTTTCACACTCGGATCAATTCAAATGCTTAGACAAAGCTGCAATTGTAACAGAAGAAGAAGCCAAAAATATGAATCAAAAACCAAACTTATGGAAATTAGCCACTGTCCATAGAGTTGAAGAACTAAAATGCCTCATTAGAATGCTTCCAATTTGGGGAGCAGGAATTCTAATCATAACTGCAACAACATCTCAACATAGCTTTGTGATTATCCAAGCTCGTACAATGGATCGTCATCTCTCTCGCAATTTCCAAATTTCGCCAGCCAATATGGCGATTTTCAGCGTACTAACCATGATGGTCGGCGTTATTCTATACGAACGTATCTTTGTTCCATTCGCTCGTAGATTCACGAAGAATCCAGCTGGAATTACATGTTTACAAAGAATGGGAGTAGGTTTTGTGATTAACATTATAGCCATTATAGTTTCGGCATTAGTGGAAATTAAAAGAAAGAAAGTTGCTGCAAAATACGACTTATTGGATAATCCGAAAGCGATTATTCCTATAAGTGTGTTTTGGTTGGTTCCTCAGTATTTTTTACATGGAGTGGCTGAAGTTTTTATGTCTGTTGGACATTTGGAATTTTTATATGATCAATCGCCGGAAAGTATGAGAAGTAGTGCTACGGCGTTGTACGGAGTAGCGATCGCTATCGGGAATTTTATCGGTACGTTATTGGTAACATTAGTGCATAAGTATACTGGTAAGGAAAATAATTGGTTACCTGATAGGAATTTGAATAGAGGTAGATTGGAGTATTATTATTTTCTTCTTAGTGGAATTCAAGTTATAAATTTTATTTATTATGTAATATGTGCTTGGTTCTATACTTATAAGCCTTTGGAAGAGATTATTGAAATAAACAAGCATGAAGATTTGGAACAGGTCAATGGAGAAGTTTCATTGGTTAGTTTAAAAGATGAGGGGAAGAGTATGGCAAGCTATGAGGAGGTACTGGTGGTGAAAGAAGAGGTACACAAAAACAACGGTGGCGACGAAAACAACAAGAAGAGGAAACAGCCGCGACGAGGAGGCATAAGAACACTGCCTTTCATCCTTGCTAATGAGGTATGTGATAGATTTGCTGTGGCCGGTTTTAATGGTAACTTGATAAGTTACTTAACTCAACAGCTGAATATGCCATTGGTATCAGCTGCCAATACACTCACAATCTTTGGTGGAACAGCTAGCTTTACACCTCTCATTGGTGCTCTCATTTCTGAGTCATTTGCTGGTCACTTTTGGACCATTACTATTGCTTCCATCATCTATGAACTGGGAATGATAAGCATAACACTATCAACTATACTCCCACACATGCGTCCTCCACCATGCCCAACACAACTCAATTGTCAAGAAGCCACATCCTCACAACTATCAATGTTTTTCGTCTCTCTTGTTCTCATATCCCTTGGATCAGGTGGCATTAGACCTTGTGTTGTACCCTTTTTAGGAGAACAATTTGACATGACTAAAAAAGGTGTAGCATCAAGAAAATGGAACATTTTCAATTGGTACTTTTTCTTCATGGGTATAGCTTCTCTAAGTGCTTTAACCATTGTGGTTTACATTCAAGATAATACTGGTTGGGGTTGGGGCTTTGGCATACCAACAATTGTTATGTTTTTGTCCATTGTGGCCTTTGTGTTGGGCTCACCATTTTATAATACTGAGAAGCCCAAAGGAAGCCCAATGGTTCGTTTGGCCCAAGTAACTGTGGCAGCTGTGAGAAAGAGGAAAGAAGTTTTACCAAATGATCCCAAATATTTATACCAAAATAGGGAGGTTGATGCTGGTATTTCCTTGGAAGGAATGCTTTTACACACAAATGAATATAAATGGTTGGACAAGGCAGCAATTGTCACAGGAGAAGAGGGAACAGACCCAAATGCACCACCAAACTTTTGGAAATGTGCCACTGTCCATAGAGTTGAGGAGCTAAAATCAATCATAAGAATCCTTCCAATTTCCGCCTCAGGAATTTTACTTATAGCGGCTTCAGCACACTTACCGAGCTTTGTCATCGAACAAGCTCGAACAATGGACCGTCACCTCTCTCACACATTCCAAATATCTCCCGCCAATATGTCAATTTTCAGCGTAATAACAATGATGATAGGCGTCATTCTATACGAACGCCTATTTGTCCCCTTAATCCGTAAACTAACAAAGAATCCTGTCGGAATCACGTGCATACAAAGAATGGGAATAGGATTTGTAATCAACATTATAGCCACATTAATTTCAGCACCTGTTGAAATCAAAAGGAAAGAAGTAGCTGCTAAGTACGGCTTATTGGACGATCCAAAAGCGATTATTCCTATAAGTGTTTTTTGGTTAGTACCTCAATATTGCTTTCATGGACTTGCTGATGTTTTCATGTCTGTTGGACTTTTTGAGTTTCTGTTTGATCAAGCACCTGAAAGTATGAGAAGTAGTGCTACTGCTATATATTGCATAATTATAGCTATTGGAAGCTATGTTGGTACATTTATAGTAACACTTGTGCATAAATATAGTGGCAAGGAAAATAATTGGTTACCTGATAGGAACCTTAATAGGGGTAAATTGGAATACTATTATTATCTTGTTAGTGGTGTTCAAGTTCTAAATCTCATTTATTTTGGAATTTGTCTCTGGTTTTACACTTATAAGCCATTGGAAGAAATTAGTAATGTGAATAAGGAAGAAGATTTGGAACAGGTTGATACAAAAATCTTAGATGCCAATTTAGAAGAGAAACTTTAG	3615	0.382	MLDIEEESGMRGNGEMEKEKSKQKQRGGIRTLPFILANEVCDRFASAGFHANMISYLTQQLNMPMVKASITLSNFSGLSSLTPLLGAFVADSFAGRFWTIVVATLIYELGLITITTSAIVPHFHPPPCPTQMHCQEPKSSHLWILYLALFLTSLGSGGIRSCVVPFSGDQFDMTKKGVESRKWNLFNWYFFCTGLASLSALTIVVYIQDHMGWGWGLGIPTIAMFISLIAFVLGSRLYKTFKPNGSPFVRLAQVIVAAVKKRNEVLPQDPKLLYQNMELDSPISLEGRLSHSDQFKCLDKAAIVTEEEAKNMNQKPNLWKLATVHRVEELKCLIRMLPIWGAGILIITATTSQHSFVIIQARTMDRHLSRNFQISPANMAIFSVLTMMVGVILYERIFVPFARRFTKNPAGITCLQRMGVGFVINIIAIIVSALVEIKRKKVAAKYDLLDNPKAIIPISVFWLVPQYFLHGVAEVFMSVGHLEFLYDQSPESMRSSATALYGVAIAIGNFIGTLLVTLVHKYTGKENNWLPDRNLNRGRLEYYYFLLSGIQVINFIYYVICAWFYTYKPLEEIIEINKHEDLEQVNGEVSLVSLKDEGKSMASYEEVLVVKEEVHKNNGGDENNKKRKQPRRGGIRTLPFILANEVCDRFAVAGFNGNLISYLTQQLNMPLVSAANTLTIFGGTASFTPLIGALISESFAGHFWTITIASIIYELGMISITLSTILPHMRPPPCPTQLNCQEATSSQLSMFFVSLVLISLGSGGIRPCVVPFLGEQFDMTKKGVASRKWNIFNWYFFFMGIASLSALTIVVYIQDNTGWGWGFGIPTIVMFLSIVAFVLGSPFYNTEKPKGSPMVRLAQVTVAAVRKRKEVLPNDPKYLYQNREVDAGISLEGMLLHTNEYKWLDKAAIVTGEEGTDPNAPPNFWKCATVHRVEELKSIIRILPISASGILLIAASAHLPSFVIEQARTMDRHLSHTFQISPANMSIFSVITMMIGVILYERLFVPLIRKLTKNPVGITCIQRMGIGFVINIIATLISAPVEIKRKEVAAKYGLLDDPKAIIPISVFWLVPQYCFHGLADVFMSVGLFEFLFDQAPESMRSSATAIYCIIIAIGSYVGTFIVTLVHKYSGKENNWLPDRNLNRGKLEYYYYLVSGVQVLNLIYFGICLWFYTYKPLEEISNVNKEEDLEQVDTKILDANLEEKL*	1205

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g1343	1204	PANTHER	NITRATE TRANSPORTER 1	619	1184	-	-
	Tpr6g1343	1204	PANTHER	NITRATE TRANSPORTER 1	17	580	-	-
	Tpr6g1343	1204	Gene3D	MFS general substrate transporter like domains	2	572	IPR036259	-
	Tpr6g1343	1204	Gene3D	MFS general substrate transporter like domains	608	1178	IPR036259	-
	Tpr6g1343	1204	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	619	1184	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Tpr6g1343	1204	PANTHER	OLIGOPEPTIDE TRANSPORTER-RELATED	17	580	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Tpr6g1343	1204	MobiDBLite	consensus disorder prediction	1	25	-	-
	Tpr6g1343	1204	Pfam	POT family	97	529	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Tpr6g1343	1204	Pfam	POT family	703	1135	IPR000109	GO:0016020\|GO:0022857\|GO:0055085
	Tpr6g1343	1204	SUPERFAMILY	MFS general substrate transporter	621	1180	IPR036259	-
	Tpr6g1343	1204	SUPERFAMILY	MFS general substrate transporter	23	572	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g1343	Tpr-Chr6	14221425	14230114	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g1343	37	597	Organic Solute Cotransporters	AT1G68570	56.814	0.0	649

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g1343	-		K14638	vun:114190486	1801.95