Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1332 ATGAGATTGTTCGAAATGGCCGTTGCCATTGATCAACAACACCATGGATTTAAGCCATTTAGTCGATCCCAGAGATGCAAACTCCAATCCTTTGGTCACCTTGATTACAACAACATTCTTGAACTCAACCAAACTACTATTCTAGCATTTCAAGCCGATAATATTCACCGCAGTTTCTCCACTCCATGTCTACCCTTAACCGGGGTAGAAGATCTCAATCCTCCTCATCCTAGGATTGAGATCGTTCGTGGAAGTGGAGCTCCGGTACACGCTCTAGTCGTCGAGGTTGCAGTTGCTATGGCCTCAGGTATTCAACCTATTCCACTCCCTAGTGGACTTGGTGGTGCCTATGTTTTCCATAACCAAAATGGTAACAACATTGCTGTAGCAAAACCAGTAGACGAAGAACCTTTCGCCTTGAATAACCCGGAAGGCTTACAAAGTACTAATCATCAAATGCTAGGCCAACCTAGCTTAAAGCGTCCCATTCGAATCGGCGAAACTGGTATAAGAGAATTAGCTGCTTATCTACTTGATCATGGAGGATTTTCTGGTGTGCCACCAACTGCTTTAGTTAAATTCTGTCATGCTACATTCTCCGATTCTTCTGCCACTGTTAAACTCGCTTCACTCCAACGCTTTGTTGGTCATGGTTTCGATGCAGGAGAGTTAGGCCCTTCTCTCTTTTCAGTTGATTCTGTTCACAAAATTGGTATTCTAGACATTAGGCTTATGAATCTTGATAGACATGCAGGGAATATGCTTGTTATGAAACATGATCACAATAGTTTTGTTAATGGCAATGCTGCGGCCGATCTTGTTCCGATTGATCACGGCTTTTGCTTACCTGAGTGGCTAGATGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCTTCAATTCCTTTCTCTGAATCAGAACTTGAGTATATTTCAAAACTTGATCCTTTTAAAGACGCTGATATTCTAAGATCCGAGGTTCCTTCGTTGAGAGAATCATCTATTCGCGTTCTTATCGTTTGCACGGTTTTCTTGAAACAAGCTGCTGTTGCTGGCCTTTGTCTTGCTGATATAGGCCAGATGATGACAAGGGAATTTTGCCGTGGCGAGGAATCGTCAAGCGAATTGGAAAACATTTGTTTGAAACTCAAGACTAATATCAACAATGAGAATGGAAAAGAACAAGATGAAAAAGAGACTAATTGTGGAATTAGTGGCATTTCTTTTGGTGACATGAACAAAGGTGAATGGGAATTGTTTTTGGAGAATTTTGATAAGTTTGTTATTGGAGTTTTTGAGGATAACAAGTGTAAGAATTGA 1320 0.4129 MRLFEMAVAIDQQHHGFKPFSRSQRCKLQSFGHLDYNNILELNQTTILAFQADNIHRSFSTPCLPLTGVEDLNPPHPRIEIVRGSGAPVHALVVEVAVAMASGIQPIPLPSGLGGAYVFHNQNGNNIAVAKPVDEEPFALNNPEGLQSTNHQMLGQPSLKRPIRIGETGIRELAAYLLDHGGFSGVPPTALVKFCHATFSDSSATVKLASLQRFVGHGFDAGELGPSLFSVDSVHKIGILDIRLMNLDRHAGNMLVMKHDHNSFVNGNAAADLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSESELEYISKLDPFKDADILRSEVPSLRESSIRVLIVCTVFLKQAAVAGLCLADIGQMMTREFCRGEESSSELENICLKLKTNINNENGKEQDEKETNCGISGISFGDMNKGEWELFLENFDKFVIGVFEDNKCKN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1332 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 401 - -
Tpr6g1332 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 402 438 - -
Tpr6g1332 439 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 103 396 IPR000403 -
Tpr6g1332 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 402 438 IPR044571 -
Tpr6g1332 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 401 IPR044571 -
Tpr6g1332 439 Pfam Phosphatidylinositol 3- and 4-kinase 113 357 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1332 Tpr-Chr6 14051686 14054874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1332 5 411 Acyl Lipid Metabolism Gene Families AT2G40850 57.343 1.08e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1332 - - gmx:100809677 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1332 6 14051686 14054874 Tpr6g1332 6 14051686 14054874 ECH