Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1327 ATGACTGCTCAAACTCAAGAAGAGCTTCTCGCTGCTCATCTCGAACAACAAAAGATCCATCATGATGAGCCTGTAGTTGAAGATGATGATGACGAGGAGGATGAGGAAGATGATGAAGACGATGATGAGGAAGATGACAATGCAGAAGGTCTTGACGTTGATGCATCTGGTAGGTCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGTAAGGCAATGCTTAAACTTGGAATGAAGTCTGTTACTGGTGTCAGTCGTGTGACAGTCAAGAAAAGCAAGAATATCTTGTTCGTCATCTCAAAACCAGATGTTTTCAAGAGCCCAACTTCCGACACCTACATTATATTTGGAGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCTGAGCAGTTTAAGGCTCCTAATTTGAGCAATGCAGGAGTGAAGCCAGAATCCTCGGGTATTGCTCCGGAAGAAGAAGATGTCGACGAGACTGGTGTAGACCCCAAGGATATTGAGTTGGTGGTGACTCAAGCTGGTGTGCCAAGATCAAGAGCTGTTAAAGCTCTCAAAGCTGCCAACGGAGACATTGTTGCCGCCATTATGGAGCTCACTAATTAA 612 0.4493 MTAQTQEELLAAHLEQQKIHHDEPVVEDDDDEEDEEDDEDDDEEDDNAEGLDVDASGRSKQTRSEKKSRKAMLKLGMKSVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNAGVKPESSGIAPEEEDVDETGVDPKDIELVVTQAGVPRSRAVKALKAANGDIVAAIMELTN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1327 203 MobiDBLite consensus disorder prediction 1 72 - -
Tpr6g1327 203 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 203 - -
Tpr6g1327 203 CDD UBA_NAC_euk 166 202 - -
Tpr6g1327 203 SMART NAC_2 65 121 IPR002715 -
Tpr6g1327 203 MobiDBLite consensus disorder prediction 51 72 - -
Tpr6g1327 203 MobiDBLite consensus disorder prediction 139 165 - -
Tpr6g1327 203 Gene3D - 71 124 IPR038187 -
Tpr6g1327 203 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 203 IPR016641 GO:0005854
Tpr6g1327 203 Pfam HYPK UBA domain 163 202 IPR044034 -
Tpr6g1327 203 Pfam NAC domain 65 120 IPR002715 -
Tpr6g1327 203 Gene3D - 164 201 - -
Tpr6g1327 203 MobiDBLite consensus disorder prediction 26 50 - -
Tpr6g1327 203 ProSiteProfiles NAC A/B domain profile. 62 127 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1327 Tpr-Chr6 13974453 13976500 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1327 K03626 - gmx:100500056 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1327 6 13974453 13976500 Tpr6g1327 6 13974453 13976500 ECH