Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1319 ATGAACCCATTATCAACCTTCAGACACACAATCTTCCAATCAACAACAATCTCATTCTCACCCTTTTTCCTCTTCAACCAAAAACGATGGAAAAAACCCACCATTTCAGCTCAAACCCGTTTGGAGGATCGAGTAAGAGACACCCACTTCGACAAATTAACAACCCACTTCAAAAAACTCAATCTTGTTCTCAAAATCCATAATCTCATGTCAAATCGAAAACGAGGTTCTTTTGTTTCTCTTCAGTTAATGTCCCGTTGGAGAAACATCATTGGACTCAATGTTACTGTTACTTCATTTCTTCAAAAGTATCCTCATGTTTTTGATTTGTTTGTTCACCCTTTTAGGAGGAACATGTGCTGTAGAATCACTAGGAAGATGAAGGAGTTGATATTGTTGGAAGATGTTGTTATGAAACAACATGAGATTGAGGTTGTTAAAAGAGTGAAGAAGTTGCTTATGATGTCTTTGAATGGTACTCTTCATGTGCATGCGTTGAGGTTGATTAGAAGAGAATTGGGTCTTCCTTGTGATTTTAGAGAATCCGTTTTTGGGAAATATAGTGATGAGTTTAGGTTGGTTGATTTAGAGACTGTGGCTTTGGTTGGTTGGGATGATGAATTAGGAATAGCTCATGTTGAGAAATGGAGGGAGAGAGAGTATAGAGAGAAATGGTTGAGTGAATTTGAGACCAAGTTTGCATTTCCTATAAATTTTCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGGGAAAAGTTGAAGACTTGGCAAAGGCTTTCTTATACAAAGCCTTATGAAAGAAAAGATGTCAAATGTGGCGGGGCACAACGATATGAGAAGAGGGCTGTTGCTGTTATTCATGAACTTTTGAGTTTGACTGTGGAGAAAATGGTTGAGGTTGATCAATTGGCTCATTTTCGAAGGGATTTTGCTATTGAAGTTAATATGCGCGAGCTACTGCTAAGGTATCCGGGGATATTTTATATATCTACAAAGGGAAATGCTCAAACTGTTTTTCTTAGGGAGGCTTATGAAAAAGGAGGGTTGGTTGAGCCTAATCCGGTGTATGCAGTTCGTAGGAATATGTTGGAACTTGTGTTATTAGGGCGTAGGAAAACCAAACAATTGTTAGCTTGTGATGAATTTAAGGAAGAGAGCAATAATGTAGTATGTGAAGTAGATGGGAATGGTAAAAGAGATGGTGATTGGGCGATTCCATTCTTGGAGAGTTCTGAGAAGAATTGA 1245 0.3831 MNPLSTFRHTIFQSTTISFSPFFLFNQKRWKKPTISAQTRLEDRVRDTHFDKLTTHFKKLNLVLKIHNLMSNRKRGSFVSLQLMSRWRNIIGLNVTVTSFLQKYPHVFDLFVHPFRRNMCCRITRKMKELILLEDVVMKQHEIEVVKRVKKLLMMSLNGTLHVHALRLIRRELGLPCDFRESVFGKYSDEFRLVDLETVALVGWDDELGIAHVEKWREREYREKWLSEFETKFAFPINFPTGFKIERGFREKLKTWQRLSYTKPYERKDVKCGGAQRYEKRAVAVIHELLSLTVEKMVEVDQLAHFRRDFAIEVNMRELLLRYPGIFYISTKGNAQTVFLREAYEKGGLVEPNPVYAVRRNMLELVLLGRRKTKQLLACDEFKEESNNVVCEVDGNGKRDGDWAIPFLESSEKN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1319 414 Pfam Plant organelle RNA recognition domain 45 370 IPR021099 GO:0003723
Tpr6g1319 414 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 13 412 - -
Tpr6g1319 414 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 412 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1319 Tpr-Chr6 13730083 13736027 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1319 - - gmx:100789857 607.06