Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1318 ATGGCTTCTTTCCCTCCTCCTGGTTCACTCACCCTCTGCGAACTCAACCGCGACCTAATCACCGTTGACGCCCTCTCCGACGATCGTGCCAACCAAACCTACGGAAAGCTTCTCGGATTGGTATTCAGCCCCGTGCCGTTTCAATCACTGCCACCACCTCTTGAGAACGACGTTCCAGAACAGGAAGGAACTACACCAACAACCGCCATTGCCGGGGAAACTGTTTCGAGAAAAGGTCCTGTGGCACTTTTGCAAGGCATTGTAAATGATTGTCTCAGACGCCTCTTTTATCCTAATGATGTTCATTTGTTGCCTGAGGTTAATCTTCAAGGAGTCAGTTGGCACCTTAATAAGCATATAATTGCTTTTATTCCTGGGCCGAACCAAGTTTTAGTTCGTGATTATGAAGATCCAGATGGGAAGGACTCGATTCTTTTGACAAATGAGTCTCAGAGAGATGTTAAAGTGCTAGAGTGGAGGCCTAATGGTGGGAGGATGCTTGCTGTGGGTTGCAAGAGTGGAATTTGCATTTGGTCTGCTTCATATCCTGGAAATGCAGCATCTGCTAGATCTGGCACTATTTCTTTTGTAGGAAGTTTATCTAGAGGCTCTGGAATTCGGTATCTCTTGGTCGATTTTCTTCGAAGTCAAAATGATGAACATGTTAGCGCCCTTACATGGAGTCCGGATGGAAGATACTTAGCTTCTGCTTCATATGAGAGCTCTTCATTCACTGTGTGGGATGTTGCTCAAGGTGTGGGGACACCCATTCGACGAGGATTAGCAGGCATATCAATGCTAAAGTGGTCACCCACTGGAGATTACTTTTTTGCTTCAAAATTTGATGGAACGTTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCGTCGTCTAGTGGTTTTGTCAAGTGTGCAACATGGGATCCAGATGGACGTATGATACTGCTTGCGTTTTCCAAATCATCAACTTTGGGTTCTGTTCACTTTGCATCAAAGCCTCCCTTGTTAGATGCACATCTGTTACCTGTCGACTTGCCAGAGATATTATCATTGACAGGCAGTCAGGGAATTGAAAAAATAGCATGGGATAATTCAGGAGAACGATTGGCTGTGTCTTTTAAAGGCGGAGATGATGTATACGGCGGTCTGATTGCCATCTATGATACAAGAAGGATTCCTCTGATATCTACATCATTAATTGGATTTATAAGAGGGCCTGGAGACAATCCAAAACCAATCTCATTTTCATTTCACGGGAAGTTTAAGCAGGGACCATTGCTCTCTGTGTGTTGGAGCAGTGGATTTTGTTGCACTTACCCACTGTTATTCCGATCTCATTAG 1350 0.4452 MASFPPPGSLTLCELNRDLITVDALSDDRANQTYGKLLGLVFSPVPFQSLPPPLENDVPEQEGTTPTTAIAGETVSRKGPVALLQGIVNDCLRRLFYPNDVHLLPEVNLQGVSWHLNKHIIAFIPGPNQVLVRDYEDPDGKDSILLTNESQRDVKVLEWRPNGGRMLAVGCKSGICIWSASYPGNAASARSGTISFVGSLSRGSGIRYLLVDFLRSQNDEHVSALTWSPDGRYLASASYESSSFTVWDVAQGVGTPIRRGLAGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSSSGFVKCATWDPDGRMILLAFSKSSTLGSVHFASKPPLLDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDVYGGLIAIYDTRRIPLISTSLIGFIRGPGDNPKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1318 449 Pfam WD domain, G-beta repeat 220 248 IPR001680 GO:0005515
Tpr6g1318 449 Gene3D - 100 257 IPR015943 GO:0005515
Tpr6g1318 449 SMART WD40_4 141 179 IPR001680 GO:0005515
Tpr6g1318 449 SMART WD40_4 207 248 IPR001680 GO:0005515
Tpr6g1318 449 SMART WD40_4 250 289 IPR001680 GO:0005515
Tpr6g1318 449 SMART WD40_4 347 391 IPR001680 GO:0005515
Tpr6g1318 449 PANTHER ALADIN/ADRACALIN/AAAS 1 449 IPR045139 -
Tpr6g1318 449 Gene3D - 262 441 IPR015943 GO:0005515
Tpr6g1318 449 SUPERFAMILY WD40 repeat-like 109 436 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1318 K14320 - gmx:100808599 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1318 6 13715395 13721827 Tpr6g1318 6 13715395 13721827 ECH