Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1314 ATGACTTTTTCTTCAAAAGCTAATTGCAGTTTTCTTAGGGTCTACCTTCTTATTATAATGTCTTGTGTTGCATTACAATGCAATGCTGATGCTATTGCTAACCAAACTTCAACTCTAGTTGTAGATGCTTCTGATGGATTTGGAAGACCAATTCCTAAAACACTTTTTGGAATATTTTTTGAGGAGATCAATCATGCAGGCGCTGGGGGATTATGGGCAGAACTTGTGAACAATAGAGGCTTTGAAGCTGGTGGAACACAAGTCCCATCAAATATTGACCCTTGGACCATATTTGGACCAGAATCATCTGTTTCAGTACAAACTGAGCTTAATTCTTGCTTTGAACGCAATAAGGTTGCTTTGAGAATTGATGTTCTATGTGACAATTGCCATCCTAATGGTGTTGGAATCTCTAACCCCGGTTTTTGGGGCATGAATATTGTGAAAGGGAAGAAATACAAGGTAGTGTTCTTTGCTCGTTCAATAGGAGCACTAAATATGATGGTAGCATTCAGAAAAGCACAAGGTGGAGAAATATTGGCTTCTAGCAATATCAAAGGTTCTGCCATAGAGGTTTCAGAATGGAAAATGTTTGAAACAATATTAGAAGCAAGTGCATCAAGTTCTAATTCAATTCTTACCTTAACAACAACTCAAAAAGGGAAGATATGGTTAGATCAAATATCTGCTATGCCTGTTGACACATTTAAGGGACATGGTTTCCGAAGTGACTTGGTTGACATGCTGATACAGTTGAAACCAGCATTTTTAAGATTTCCAGGTGGTTGTTTTATTGAAGGACAATCATTAAGAAATGCATTTAGGTGGAAAGATAGTGTTGGACCCTGGGAACAGAGACCAGGACATTTTGGTGATGTTTGGAATTATTGGACTGATGATGGACTTGGATTTTTTGAAGGTCTTCAACTAGCAGAGGACATTGGTGCAATGCCAGTGTGGGTCTTCAACAGCGGCATCAGCCATACTGATGAAATTGATACAAGAGTCATTGCACCTTTTGTGCAAGATGCACTTGATGGTATTGAGTTTGCCATAGGTCCACCTACTTCAAGATGGGGTTCCCTTAGAGCCTCTATGGGACACCCACAACCTTTTGACTTAAGATATGTTGGTGTTGGAAATGAAGATTGTGGGAAGCTAAATTATCTTGGAAATTACCTAGCCTTCTACAATGCAATTCGACATGCTTATCCAGCTATTCAAATTATTTCAAATTGTGATGCTTCCGCCATACCATTAAATCACCCGGCTGACTTGTATGATTATCATACTTATCCTCTTGATGTTCAACAAATGTTTAGTAATGCTCATGTTTTTGATAAGACACCACGCAATGGACCAAAGGCTTTTGTGAGTGAGTATGCTCTAATTGGAGATAGACAAGCCAGGAATGGAACCCTTTTCGGAGCTGTTTCTGAAGCTGGATTTCTTATTGGATTAGAAACCAACAGTGATCATGTTGTAATGGCTTCCTATGCACCACTTTTTGTAAATGCAAATGATAGAAAGTGGAGCCCAGATGCAATTGTGTTTAACACAAATCAAGCTTATGGAACACCTAGCTATTGGGTGCAATATATGTTTAAAGAATCAAATGGAGCACAATTTCTCAAGTCACAACTTCAAACAACTAATCACAACTTAGTGGCTGCATCTGCAATTCTTTGGCAAAACCCTCAAAATAAAAATACTTACTTAAGAATAAAGATTGCAAACATAGGGCACAAACATGTGAATCTCAAGATTTCTATTAAGGGATTTAAGAGCAAAAATCCAACCGAGTCAACAATGACTATTCTCACATCTAAACATGGAATGGATGAGAATAGCTTCTCCCACCCAAAAAAGATAATACCACAACAAAGTCAACTTCAGAATCCTGGCAATGAGATGAATGTCATAATCCCTCCAATTTCATTCACAGTATTTGATATGTTAAGATAA 1965 0.3802 MTFSSKANCSFLRVYLLIIMSCVALQCNADAIANQTSTLVVDASDGFGRPIPKTLFGIFFEEINHAGAGGLWAELVNNRGFEAGGTQVPSNIDPWTIFGPESSVSVQTELNSCFERNKVALRIDVLCDNCHPNGVGISNPGFWGMNIVKGKKYKVVFFARSIGALNMMVAFRKAQGGEILASSNIKGSAIEVSEWKMFETILEASASSSNSILTLTTTQKGKIWLDQISAMPVDTFKGHGFRSDLVDMLIQLKPAFLRFPGGCFIEGQSLRNAFRWKDSVGPWEQRPGHFGDVWNYWTDDGLGFFEGLQLAEDIGAMPVWVFNSGISHTDEIDTRVIAPFVQDALDGIEFAIGPPTSRWGSLRASMGHPQPFDLRYVGVGNEDCGKLNYLGNYLAFYNAIRHAYPAIQIISNCDASAIPLNHPADLYDYHTYPLDVQQMFSNAHVFDKTPRNGPKAFVSEYALIGDRQARNGTLFGAVSEAGFLIGLETNSDHVVMASYAPLFVNANDRKWSPDAIVFNTNQAYGTPSYWVQYMFKESNGAQFLKSQLQTTNHNLVAASAILWQNPQNKNTYLRIKIANIGHKHVNLKISIKGFKSKNPTESTMTILTSKHGMDENSFSHPKKIIPQQSQLQNPGNEMNVIIPPISFTVFDMLR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1314 654 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 2 653 - -
Tpr6g1314 654 SUPERFAMILY Glycosyl hydrolase domain 526 650 - -
Tpr6g1314 654 SMART alpha_l_af_c 459 646 IPR010720 GO:0046373|GO:0046556
Tpr6g1314 654 Gene3D - 535 652 IPR013780 -
Tpr6g1314 654 Pfam Alpha-L-arabinofuranosidase C-terminal domain 460 646 IPR010720 GO:0046373|GO:0046556
Tpr6g1314 654 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 2 653 - -
Tpr6g1314 654 Gene3D Glycosidases 215 534 - -
Tpr6g1314 654 SUPERFAMILY (Trans)glycosidases 209 543 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1314 Tpr-Chr6 13657227 13663698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1314 14 654 Glycoside Hydrolase AT3G10740 58.398 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1314 K01209 - gmx:100780771 997.267