Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1311 ATGATGAACACCTCAAATAATAATTTGGCTTCTTCTCCCTCCCCTTCTGTGGCTGTCTCAGTGGAACCTCCCAAAACCAGAAGGCTCTATCAAGTTTGGAAAGGAAACAATAAATTTCTTTTTGGTGGAAGATTAGTCTTTGGGCATGATGCAAATTCTCTTTTTTTGACATCGTTCCTGATCGGAGGTCCAGCAATAATATTCTGCATAAGAATGCTATTAATAATGAATGAAGACGGCACTCTTTTTAACCAACTTGTATTTACTGGAGGAGTGATCCTCACAATTTTGGATTTTATATTTCTCTTCATGACATCTGGTAGAGATCCAGGAATTATCCCCCGGAATTCACAGCTACCTGATTCAGATGAATCAGTTCACACTAATACGGCATCTATGGAATGGGTAAACAATCGAACTCCTAACCTCAAACTACCTAGAGTGAAGGATGTGATAGTCAATGGCCATACAGTGAAAGTCAAGTTTTGCGATACTTGCTTGCTCTATCGTCCACCACGTGCTTCTCATTGCTCCATTTGTAATAACTGTGTTCAGAAGTTCGATCATCATTGCCCTTGGGTTGGTCAGTGTATTGGATCGCGTAACTATCCGTTCTTCATAATGTTCATATCATCATCAACCGTGTTGTGCATATACGTTTTCTCGTTTTCTTGGGTTACCCTTCTTCATCAAGAAGGTGGATTGTGGGCAAACATGTCACGCGATGTCCTATCGGTCACTCTCATTGCATATTGCTTCATAGCCGTTTGGTTTGTCGGTGGCCTAACAGTGTTCCATCTTTACCTGATTTCCACCAACCAGACAACTTATGAGAATTTCCGGTACCGCTATGATAAGAAGGAAAATCCATACACAAAAGGAATAGTGGCAAACTTCAAAGAACTTTCTTGTTCCAAGATTCCAAAACCACTGATCAATTTCCGACAATGGGTTGCCGAAGAGGAGGATATTCTAGACGAATCCTTTACTTCAGATCTTGAAAAAGGTTTTATAAGCTCAAAACAAAAGTTTGATATGGACATGGGATTATATGGAAAGGATGGTATGAAAGTTCCAGGTATTTTACAGGATTTGGATTACAACGGCATTGATGATCAACCGAAGAAAAAGGTAGGAGGAAAAGACGCTCCATTTGAAATTTTTGTTCCTGTCGATCAAGAACAAAAATTTGATCAATGGAGATCTAAAATTGGAGTCAATGCTCAAGATGTGAAGACATAG 1242 0.3961 MMNTSNNNLASSPSPSVAVSVEPPKTRRLYQVWKGNNKFLFGGRLVFGHDANSLFLTSFLIGGPAIIFCIRMLLIMNEDGTLFNQLVFTGGVILTILDFIFLFMTSGRDPGIIPRNSQLPDSDESVHTNTASMEWVNNRTPNLKLPRVKDVIVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIGSRNYPFFIMFISSSTVLCIYVFSFSWVTLLHQEGGLWANMSRDVLSVTLIAYCFIAVWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYTKGIVANFKELSCSKIPKPLINFRQWVAEEEDILDESFTSDLEKGFISSKQKFDMDMGLYGKDGMKVPGILQDLDYNGIDDQPKKKVGGKDAPFEIFVPVDQEQKFDQWRSKIGVNAQDVKT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1311 413 Pfam DHHC palmitoyltransferase 160 281 IPR001594 GO:0016409
Tpr6g1311 413 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 28 346 - -
Tpr6g1311 413 MobiDBLite consensus disorder prediction 1 19 - -
Tpr6g1311 413 ProSiteProfiles DHHC domain profile. 161 211 - -
Tpr6g1311 413 MobiDBLite consensus disorder prediction 1 20 - -
Tpr6g1311 413 PANTHER PROTEIN S-ACYLTRANSFERASE 3-RELATED 28 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1311 Tpr-Chr6 13599291 13602580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1311 160 302 Lipid Metabolism Gene Families AT4G22750 31.544 1.66e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1311 - - gmx:100805939 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1311 6 13599291 13602580 Tpr6g1311 6 13599291 13602580 ECH