Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1310 ATGATTGGGAATAGATATCCGCAATCTACTGGATCTTCTCCTTATGGAGGTGGGACCCACAATATGAAACCAAGGAGACTCTATCAAGTTTGGAGAGGAGGCAATAAGTTTCTCTGTGGTGGGAGACTGGTTTTTGGTCCTGATGTAGCTTCCTTGTTTCTTACGACGTTCCTAATTGCTGCACCTGCATTTACATTTTGTGTTAAGATGTATCTTAAATTCAAGAATGAGAAGGCCACTGGTCATTCTTTTTGGTGGCCTGTAATGGTCGGGGGTCTAGTTCTCACTTTTCTGGATTTCTTATTCCTCCTATTGACTTCTGGGAGAGATCCTGGAATTATCCCTAGAAATTCGACACCGCCTGAATATGAAGATGCATTTAATATACCTACTCCTTCGATGGAGTGGATTAATGGTTCAACCCCTCATCTGAAACTACCTCGAACTAAAGATGTAATGGTTAATGGTCACACAGTGAAAGTGAAATTCTGTGATACATGCTTGCTTTATCGACCCCCTCGTACTTCTCATTGTTCTATATGTGACAATTGTATCCAGAGATTTGATCATCACTGCCCTTGGGTTGGCCAGTGCATTGGAAGACGAAACTATCGGCACTTCTTCATGTTTATTTCAACATCAACCATTTTGTGCTTATATGTCTTTGTGTTCTCTTGGATCAATCTTTCCGAGAGTGGTGTTTTGGAAGCACTCTCACATGATTATGTATCAGATCTTCTCATTATATACTGCTTCATTGCTGTCTGGTTTGTTGGTGGCCTCACCGCTTTCCATTTCTATCTCGTTTGTACAAACCAGACAACTTACGAGAACTTCCGGTACCAATATGATAAAAAGGGGAATCCATACAATAAGGGATCACTAAAGAATATCAGAGAAACACTTTGTTCCAGTATTCCCCCGTCAAGGAATAATTTCCGATCATTTGTACAGCTAGATGACCATATGACAGTTGGGTCAATGACTCCGAATAATGTACATGGAATTTTGACTCCAAAGGAGAAAATTGACGTTGAAATGGGATCTAGGGGCACAGACGACCGTGGTTATCCAATTCCCGAGCTTCTACGAAATTTTGATTTTAATAGTTTTGAGGATGACATGAAGTTTGAAGATATGGAGGGACAAACTTCATTTGATCCATACTATAGTATTGATGAAGACATAAAAGACTCGTCCCGAACATCTGTTGCTACAGTTTTAAATTTCCCTAACATCACAATTGAAGAAGCAACGGAAGAGTCTGTTCATAGCTACCATGCTCATTTCGAAGTCAGAGAACCTTCCGAAAGGCACATCACTATTGAGGAAGTCAGAGAACCTTCTGATGACAGAAATGACTCACGTTAA 1371 0.4041 MIGNRYPQSTGSSPYGGGTHNMKPRRLYQVWRGGNKFLCGGRLVFGPDVASLFLTTFLIAAPAFTFCVKMYLKFKNEKATGHSFWWPVMVGGLVLTFLDFLFLLLTSGRDPGIIPRNSTPPEYEDAFNIPTPSMEWINGSTPHLKLPRTKDVMVNGHTVKVKFCDTCLLYRPPRTSHCSICDNCIQRFDHHCPWVGQCIGRRNYRHFFMFISTSTILCLYVFVFSWINLSESGVLEALSHDYVSDLLIIYCFIAVWFVGGLTAFHFYLVCTNQTTYENFRYQYDKKGNPYNKGSLKNIRETLCSSIPPSRNNFRSFVQLDDHMTVGSMTPNNVHGILTPKEKIDVEMGSRGTDDRGYPIPELLRNFDFNSFEDDMKFEDMEGQTSFDPYYSIDEDIKDSSRTSVATVLNFPNITIEEATEESVHSYHAHFEVREPSERHITIEEVREPSDDRNDSR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1310 456 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 26 330 - -
Tpr6g1310 456 PANTHER PROTEIN S-ACYLTRANSFERASE 3-RELATED 26 330 - -
Tpr6g1310 456 ProSiteProfiles DHHC domain profile. 162 212 - -
Tpr6g1310 456 Pfam DHHC palmitoyltransferase 161 281 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1310 Tpr-Chr6 13586897 13591032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1310 93 304 Lipid Metabolism Gene Families AT4G22750 28.194 2.41e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1310 - - gmx:102668608 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1310 6 13586897 13591032 Tpr6g1310 6 13586897 13591032 ECH
Tpr6g1310 6 13586897 13591032 Tpr2g0044 2 586859 591517 PCT