Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1286 ATGGGTTCTCAACCAGGTGTTCGTGAGTGGTCTGGAATCAATACATTTGCTCCTGCTACACAGACCAAATTGCTTGAACTTTTGGGAAAACTTAAACAAGAGGATGTGAACTCCTTAACCATACTTGTGATGGGCAAAGGTGGTGTTGGAAAGTCTTCAACTGTGAACTCTATCTTTGGGGATAGAGTTGTTTCAATTAGTCCCTTTCAGTCGGAAGGGGCAAGGCCAGTTATGGTGTCGCGATCAAGGGCAGGTTTTACATTGAACATTATCGATACTCCTGGTCTTATTGAAGGGGGATACATCAATGATATGGCGCTTGATATAATAAAACGTTTCCTTCTAGACAAGACCATAGATGTTTTGCTTTACGTGGACCGCTTAGATGCGTATCGAGTAGACAACTTGGACAAGTTGGTTGCCAAAGCTATAACTGACAGTTTTGGCAAAGGAATATGGAGCAAGGCTATAGTAGCACTCACACATGCCCAATTCTCTCCACCAGATGGATTGCCTTATGATGAATTCTTCTCAAAAAGATCTGAAGCTCTCTTGCAAGTTGTCAAATCAGGTGCCTCCTTAAAGAAGGATGCCTCTCAGGCTGCCATTCCGGTTGTTTTGATCGAGAACAGTGGCAGATGCAACAAAAATGAAAGCGATGAGAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCATCTAGTCCAAACAATCACAGAAGTCGCATTGAACAAAAATGAGTCTATTTTGGTTGATAAGAAGTTGATTGAAGGACCGAATCCAAATCAGAGAGGGAAACTATGGATTCCTCTCATATTTGCAGCACAATTCTTCTTCATCAAGAAGATAGAATCCATAATCAAGAATGACATTGCTAATGAAGAAAGGCCCTCATGGGAGACACGTGATGTATATGGTCGGAAAGAGAAGCGTAATCTAGGTGGTCGTCGTCGGCGTTAA 960 0.4229 MGSQPGVREWSGINTFAPATQTKLLELLGKLKQEDVNSLTILVMGKGGVGKSSTVNSIFGDRVVSISPFQSEGARPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWSKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVKSGASLKKDASQAAIPVVLIENSGRCNKNESDEKVLPNGIAWIPHLVQTITEVALNKNESILVDKKLIEGPNPNQRGKLWIPLIFAAQFFFIKKIESIIKNDIANEERPSWETRDVYGRKEKRNLGGRRRR* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1286 319 ProSiteProfiles AIG1-type G domain profile. 36 259 IPR006703 GO:0005525
Tpr6g1286 319 Pfam AIG1 family 39 225 IPR006703 GO:0005525
Tpr6g1286 319 TIGRFAM 3a0901s02IAP34: GTP-binding protein 1 304 IPR005688 GO:0006886|GO:0009707|GO:0015450
Tpr6g1286 319 PIRSF Toc33/toc34 1 308 IPR005688 GO:0006886|GO:0009707|GO:0015450
Tpr6g1286 319 Gene3D - 3 268 IPR027417 -
Tpr6g1286 319 CDD Toc34_like 8 252 - -
Tpr6g1286 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 257 IPR027417 -
Tpr6g1286 319 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 6 299 IPR045058 -
Tpr6g1286 319 PANTHER TRANSLOCASE OF CHLOROPLAST 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1286 Tpr-Chr6 13371831 13375919 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1286 - - mtr:MTR_3g090160 518.85