Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1282 ATGGAGACAATTATTGAAGCTAATGCTACAAATCATAATTCAAGTCTACAAATAACAACAAGCAATAGAGGAGTCGTATGGTTAGATCAAGTGTCAGCCATGCCTTTGGATACATATAAGGGTCATGGTTTTCGAAGTGACCTTTTCCAAATGGTGGCAAATCTGAAGCCAAAATTTTTTAGGTTCCCAGGTGGTTGTTTTGTTGAAGGAAATTATCTGAAAAATGCTTTTAGGTGGAAAGATATTGTTGGACCCTGGGAAGAAAGACCTGGCCACTTTAATGACGTATGGGGATATTGGACTGATGATGGATTTGGTTTTTTTGAGGGACTCCAACTATCAGAGGATCTTGGTGCATTTCCAGTTTGGGTGTTTAACAATGGTATTAGCCACAATGATCAAGTTAATACGACTGCAATTTCACCATTTGTGCAAGAAGCCCTAGATGGTATTGAGTTTGCTAGAGGTTCTCCCACATCACAATGGGGTTCTCTTAGAGCTTCCATGGGACATCCTGAGCCATTTGATTTAAGATTTGTTGGTGTTGGAAATGAAGATTGTGGTAAATATAACTATCTAGGAAACTACTTGAAGTTCTACGAAGCAATAAAACGTACTTATCCTGATATTCAAATTATTTCAAATTGTGACGGTTCCGATCAACCACTAAATCATCCAGCAGATCTCTATGATTTCCATATTTATGCAAATTCTAAGGACATGTTTTCCAAGTACACCAAGTTCGATAACGCTCCACGATCCGGTCCAAAGGCATTTGTTAGTGAGTATGCTGTTCAAAAGGAAGATGCCGGTGCTGGAAGCCTTTTGGCAGCTGTGGCTGAAGCTGCATTCCTTATTGGACTTGAAAAGAATAGTGATATTGTCCAAATGGTTGCCTATGCACCCCTGTTTCTGAACACAAATGATAGGAGGTGGATACCAGATGCAATTGTTTTTAACTCTTATCAAAATTATGGAACTCCGAGTTATTGGCTCCAACAACTCTTTATTGATTCTAGTGGAGCAATCTTACTCAATTCAACTCTCCATAATTCTTCTAGCTCAATTGTTGCATCTGCAATTGAATATAAAAACTCTCAAGACGGGAAGAATTATTTAAAAGTAAAGGTAGTAAACTTTGGAAATACCATCGAAAACATTGGAATTTCAATACACGGTTTAAATTCAAGTGTTCAACCGTTTGGTTCGTCAATGACAGTACTTACATCTCCAAATATAATGGACGAGAATTCCTTCTCAAAGCCAAATAAGATTGTGCCCCAAGGAACTTCACTTGAGAATGCAAGCAAGGATATGAATGTTGGACTTCTTCCTTATTCAATTACATCATTTGATCTGTTAATTTAA 1368 0.3772 METIIEANATNHNSSLQITTSNRGVVWLDQVSAMPLDTYKGHGFRSDLFQMVANLKPKFFRFPGGCFVEGNYLKNAFRWKDIVGPWEERPGHFNDVWGYWTDDGFGFFEGLQLSEDLGAFPVWVFNNGISHNDQVNTTAISPFVQEALDGIEFARGSPTSQWGSLRASMGHPEPFDLRFVGVGNEDCGKYNYLGNYLKFYEAIKRTYPDIQIISNCDGSDQPLNHPADLYDFHIYANSKDMFSKYTKFDNAPRSGPKAFVSEYAVQKEDAGAGSLLAAVAEAAFLIGLEKNSDIVQMVAYAPLFLNTNDRRWIPDAIVFNSYQNYGTPSYWLQQLFIDSSGAILLNSTLHNSSSSIVASAIEYKNSQDGKNYLKVKVVNFGNTIENIGISIHGLNSSVQPFGSSMTVLTSPNIMDENSFSKPNKIVPQGTSLENASKDMNVGLLPYSITSFDLLI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1282 455 Gene3D Glycosidases 23 338 - -
Tpr6g1282 455 SMART alpha_l_af_c 261 447 IPR010720 GO:0046373|GO:0046556
Tpr6g1282 455 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 455 - -
Tpr6g1282 455 SUPERFAMILY (Trans)glycosidases 14 344 IPR017853 -
Tpr6g1282 455 Gene3D - 344 453 IPR013780 -
Tpr6g1282 455 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 455 - -
Tpr6g1282 455 Pfam Alpha-L-arabinofuranosidase C-terminal domain 262 447 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1282 Tpr-Chr6 13339689 13348304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1282 2 454 Glycoside Hydrolase AT3G10740 65.419 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1282 K01209 - gmx:100802745 725.702