Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1265 ATGAGCGACGACATATTTGACGGACAAATATTGGCAGAGAAGTTGTTGAAACTCAACAATTCACAACAAAGCATTGAATCATTGTCCCGTTGGTGCATTCCTCACCAGAAGAGAGCAAAGGATATCGTTGAAATATGGGATAAATTGTTCAATGAATCCCAGAAAGAGCAGCGTGTCTCTTTTTTAAACCTGGCCAATGACATCTTGCAAAATAGCAGGCGGAAAGGTAGTGAGTTTGTCAATGAATTTTGGAAAGTTCTTCCAGCAGCTCTCAGGTGTGTTTATGAAAGTGGTGATGTACATGGAAGGAAAGCAGTGAACAGACTTATTGACATATGGGAGGAGAGGAAGGTTTTTGGGTCGCGAAGTCAGGGTCTTAAGGATGAACTGATGAGTAAGAATCCCCTTCCTTGCTCTGCAAGCAATGGAAAAGGTTCCGATTCTATCAAGATAGTGAAGAGGGATGCCCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAAAAAATACTAACAGCATTTCACTCTGTTCTCGATGGACATCTTGATGAGGAAGCTGCCTTGAATAAGTGTAATGCTGGTGTACATGATGTGGTTAAACTCTTGGAAGATGTCGACAAAACATTGGCTCAAGGGAACCAGCTGGGATCCACTTTGGTGAATGACTTGCAAGAGCGGGAAAAGGAGCTTAAGCAATATATGGAGCAACTCGAAAATGCCGATGCTGCCAGGACTTCTTTGCTTTCTCAGCTTAAAGATGCACTGCAGGAACAAGAATCAAAGCAAGAGCTTGTTCGTGCTCAGTTACTAGTTGTACGAGGCCAGATTGAGAAAACAGCTGGTATCAGGAAGTGGCTTGACCAAACAACACAATCCATGCGGCCATCAGTTCAACCAAACAACACCACTTCTCAACCTGATTTTACGCAATCTTCTGCATCATTTTCACCTTTTCGAACTTCTGAAGAAGATAACAAGAAGGCAGCAGCAGCAGCTGTTGCTGCTAAGCTCGCTGCCTCTGCATCATCTGCTCAGATGCTTGCATCTGCTTTTTCTTCTCTAGTAGCTGAAGAAGCTGCCTCCATGAATAGTAGCTTAAATTCCAAGGCATTTACATCAGGATTACCTGTTTTCAACCCAGAGAAAAGGCCCAGAATTGAAAAATCATCACCTGTTTCTGATGTTAACAGTTCCGATACAGCGAGCTCTTCCTTTTTCACCACTTTACAACAGCCATCATTAACAAATCCACAGTTTGTCCCGTCAGCCAACTTGCAAACCATGCCTCAAGTCAACCAATTACAAGCTGCATTTGCTTCAGCACCCCTTCCCCCTCAGTATGTCCAATCAACTGGTTTCATGGATGGAACAATTCCTTACGGATATGTATCAAATAACCTACCACCTCCACCTCATTTTCCTCCAAATGCTGCACCTAGCTCTCAACCAGCACAGCAGCAACAGCAGTCATCGCCGGGAGGATTTTACAGGCCACCTGGCATTGGATTTTATGGGCAAAGCCACCCGTCACCGCCACCACCAGTTCATAGGCAGTGA 1563 0.444 MSDDIFDGQILAEKLLKLNNSQQSIESLSRWCIPHQKRAKDIVEIWDKLFNESQKEQRVSFLNLANDILQNSRRKGSEFVNEFWKVLPAALRCVYESGDVHGRKAVNRLIDIWEERKVFGSRSQGLKDELMSKNPLPCSASNGKGSDSIKIVKRDAHSVRIKLAVGCLPEKILTAFHSVLDGHLDEEAALNKCNAGVHDVVKLLEDVDKTLAQGNQLGSTLVNDLQEREKELKQYMEQLENADAARTSLLSQLKDALQEQESKQELVRAQLLVVRGQIEKTAGIRKWLDQTTQSMRPSVQPNNTTSQPDFTQSSASFSPFRTSEEDNKKAAAAAVAAKLAASASSAQMLASAFSSLVAEEAASMNSSLNSKAFTSGLPVFNPEKRPRIEKSSPVSDVNSSDTASSSFFTTLQQPSLTNPQFVPSANLQTMPQVNQLQAAFASAPLPPQYVQSTGFMDGTIPYGYVSNNLPPPPHFPPNAAPSSQPAQQQQQSSPGGFYRPPGIGFYGQSHPSPPPPVHRQ* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1265 520 Gene3D - 4 134 IPR008942 -
Tpr6g1265 520 SMART 558neu5 10 131 IPR006569 -
Tpr6g1265 520 CDD CID_RPRD_like 9 131 - -
Tpr6g1265 520 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Tpr6g1265 520 MobiDBLite consensus disorder prediction 468 520 - -
Tpr6g1265 520 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 520 - -
Tpr6g1265 520 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 520 - -
Tpr6g1265 520 MobiDBLite consensus disorder prediction 289 321 - -
Tpr6g1265 520 Pfam CID domain 10 121 IPR006569 -
Tpr6g1265 520 SUPERFAMILY ENTH/VHS domain 16 119 IPR008942 -
Tpr6g1265 520 MobiDBLite consensus disorder prediction 481 496 - -
Tpr6g1265 520 MobiDBLite consensus disorder prediction 289 323 - -
Tpr6g1265 520 Coils Coil 222 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1265 Tpr-Chr6 13123677 13138921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1265 K15559 - gmx:100814308 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1265 6 13123677 13138921 Tpr6g1265 6 13123677 13138921 ECH