Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1261 ATGGAGGGAGATGATAATCCAAAGGAGAAGTTACTAGTGAAAAAATTAAATGATAATGAAGAATTGTCATTGGTGAAGAAGATTTGGGAAGAGAACAAATTGATGTGGGTGGTGGCAGCTCCAGCAATATTCACAAGATTTTCAACTTTTGGTATTGAAGTTATAAGTCAAGCTTTTATTGGTCATATTGGTTCAAAGGAACTTGCTGCCTTTTCTCTTGTTTTCACTGTTCTTATTAGATTTGTCAATGGTATTTTGTTAGGAATGGCAAGTGCATTGTCAACACTATGTGGACAAGCATATGGTGCAAAAAAATATGAAATGATGGGAGTATATCTTCAAAGATCATGGATAGTTTTATCAGTAACAGCACTCATACTTGTTCCACTATTCATCTTCACAGAACCAATTTTGATTTTCTTAGGCCAAGATGAATCCATATCACAAATAGCAGGAATAATTGGTTATTGGTCAATTCCAACTTTGTTTGCTTTTATTGCCTCATTCACTTGCCAAACATTCCTTCAATCACAAAGCAAGAATATCATTATTGCATTCTTGGCAGCTTTCTCTATTGCTGTTCAGATATTACTCTCTTGGCTTTTCACAATGAAATTCAATTTTGGAATTACTGGTGCAATGGTTTCAACAATTTTGGCATTTTGGATTCCAAATATTGGTCAAATTATATTTATTACATGTGGTTGGTGTTCTAATACTTGGAAAGGTTTCTCATTTTTGGCTTTCAAAGATCTTTGGCCTGTTGTCAAACTCTCCCTTTCATCAGGTGTCATGTTATGTTTTGAGCTATGGTACAACACAATTTTGATTCTTTTAACAGGCAACATGGAAAATGCAGAGGTTCAAATTGATGCTCTATCCATATGTCTCAATATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGTGTTAGAGTGGCAAATGAGCTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTTGCAGTGAATGTGATAGTGCTTACATCATTCACAATTGGGTTCCTTCTGTTTTTATTTTTCTTATTTTTTAGGGAAAGACTTGCTTATATTTTTACCTCAAATAAAGATGTGGCCTCAGCTGTTGGTGATTTGTCACCTCTATTGGCAGTTTCCATACTACTAAACAGTGTCCAACCTGTACTATCAGGAGTTGCTATTGGAGCAGGGTGGCAAGGCATTGTAGCATATGTAAACCTAGGTTGTTACTACATCATAGGCATTCCAGTTGGGATTGTTCTTGGTAACATTTTACATTTGCAAGTTAAGGGTATATGGATTGGGATGTTGTTTGGAACACTTATTCAGACTATAATACTACTCATAATCAGCTACAGAACTGATTGGGAAAAACAGGTAACTATTGCTAGGAATCGTATGAACAAGTGGTCTAAGGTGGACACTGATCATGAAACAGTAGTTGCATCAGATAATTAG 1470 0.3592 MEGDDNPKEKLLVKKLNDNEELSLVKKIWEENKLMWVVAAPAIFTRFSTFGIEVISQAFIGHIGSKELAAFSLVFTVLIRFVNGILLGMASALSTLCGQAYGAKKYEMMGVYLQRSWIVLSVTALILVPLFIFTEPILIFLGQDESISQIAGIIGYWSIPTLFAFIASFTCQTFLQSQSKNIIIAFLAAFSIAVQILLSWLFTMKFNFGITGAMVSTILAFWIPNIGQIIFITCGWCSNTWKGFSFLAFKDLWPVVKLSLSSGVMLCFELWYNTILILLTGNMENAEVQIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSAKAAKFAVNVIVLTSFTIGFLLFLFFLFFRERLAYIFTSNKDVASAVGDLSPLLAVSILLNSVQPVLSGVAIGAGWQGIVAYVNLGCYYIIGIPVGIVLGNILHLQVKGIWIGMLFGTLIQTIILLIISYRTDWEKQVTIARNRMNKWSKVDTDHETVVASDN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1261 489 Pfam MatE 264 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr6g1261 489 Pfam MatE 41 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr6g1261 489 PANTHER PROTEIN DETOXIFICATION 13 475 - -
Tpr6g1261 489 CDD MATE_eukaryotic 31 464 IPR045069 GO:0042910|GO:1990961
Tpr6g1261 489 TIGRFAM matE: MATE efflux family protein 41 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr6g1261 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1261 Tpr-Chr6 13028215 13035682 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1261 K03327 - gmx:100789487 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1261 6 13028215 13035682 Tpr6g1261 6 13028215 13035682 ECH