Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1249 ATGGTAGAGAGAAATGCTTCTGCCATTAAGGTTGTTTCAAGAAAATCATTATGTTTCTTTTTCACAACAACAACATTATTATTCATCATGTCATGGCTTTTCGTTCTTCGTTCAACGCGCTCCGATTCAACACAAGACGCCATTTCACAGCTTATCTCCACCACATTTGATAACTCCGGTTCCGAATCATCATCTCAATCGCAAAACTCTGAATCCTCGTTCAACAATAGAGCAATTCTTGTAAACACCAAAACACAAACACATGATATACCAAAATGCAACACTGACACAACCACATCAAATGACAACAACAATAGCAACAACAGCAGCATCATCATCATCAACAATAACAAAGTTGTTTTGAAAGTTTTCATGTACGATTTACCTTCGGAATTTCATTTCGGATTATTAGATTGGAAAGGCGACGAAAAAAGAAAAATTGTTTGGCCTGATATGAAAACCAATGTACCACATTATCCTGGTGGTTTGAATTTACAACATAGTATTGAATATTGGCTAACATTAGATATTCTAGCATCAGAATTTCCAGAAACTTATCCGAACAATGCTAGAACTGTAATCAGAGTTAAGAACTCAAGTGATGCTGATGTTATATTTGTGCCATTTTTTTCATCTTTGACTTATAACAGATACTCGAAAACAGGTCCGCACGAAAGGAGGAGTAGAAACAAGGTGTTGCAAGAGAAGTTGGTTAGGTATTTGATGAGTCAAGAGGAATGGAAAAGGTCTGGTGGAAGAGATCATTTGATTTTGGCTCATCATCCTAATAGTATGTTGGATGCTAGAATGAAGTTGTGGCCTGCAACTTTTATTTTGTCTGATTTTGGAAGATATCCTCCTAATATAGCGAATGTTGAGAAAGACGTGATTGCGCCGTATAAACATGTTGTTGGTTCTTATGTTGATGATCAATCTACCTTTGATAGCAGAAAAACTTTGCTTTACTTCCAAGGAGCTATTTACAGAAAAGATGGAGGCTATGCTAGACAAGAACTATTTTATCTTCTAAAAGATGAAAAAGATGTACATTTTTCATTTGGGAGTGTTCAAAAAGGCGGAGTGAGGAAATCAACAGATGGAATGCGCTCATCCAAATTCTGCCTCAACATAGCCGGCGACACACCATCATCAAATCGCTTATTTGACGCCATTGCAAGTCACTGTGTTCCTGTAATAATCAGTGATCAAATTGAGCTTCCATATGAAGATGTTCTTGACTACTCCGAGTTCTGTATATTTGTTCGAACAAGAGACGCTCTTAAAAAGAAGTTTCTGATAGACTTCATGAGGAGTATTGGCAAAGATGAGTGGACAAGAATGTGGAACAGGTTGAAAGAAGTTGAAAAATTCTTTGAGTTTCAGTTCCCTTCTAAGGAAGGTGATGCTGTACAAATGATTTGGCAAGCTGTTGCGCGTAAGGTTCCGTTTATAAAGTTGAAAACAAACAGGTCTAGGAGATTTTTTAGGTCTGTTTATGGTAATAAAGATAAGGGACATAAATCTATACCTGCACCAGCTAATTTTTGGTGA 1551 0.3694 MVERNASAIKVVSRKSLCFFFTTTTLLFIMSWLFVLRSTRSDSTQDAISQLISTTFDNSGSESSSQSQNSESSFNNRAILVNTKTQTHDIPKCNTDTTTSNDNNNSNNSSIIIINNNKVVLKVFMYDLPSEFHFGLLDWKGDEKRKIVWPDMKTNVPHYPGGLNLQHSIEYWLTLDILASEFPETYPNNARTVIRVKNSSDADVIFVPFFSSLTYNRYSKTGPHERRSRNKVLQEKLVRYLMSQEEWKRSGGRDHLILAHHPNSMLDARMKLWPATFILSDFGRYPPNIANVEKDVIAPYKHVVGSYVDDQSTFDSRKTLLYFQGAIYRKDGGYARQELFYLLKDEKDVHFSFGSVQKGGVRKSTDGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDQIELPYEDVLDYSEFCIFVRTRDALKKKFLIDFMRSIGKDEWTRMWNRLKEVEKFFEFQFPSKEGDAVQMIWQAVARKVPFIKLKTNRSRRFFRSVYGNKDKGHKSIPAPANFW* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1249 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 497 IPR004263 GO:0006486|GO:0016757
Tpr6g1249 516 Pfam Exostosin family 120 432 IPR040911 -
Tpr6g1249 516 PANTHER EXOSTOSIN FAMILY PROTEIN 6 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1249 Tpr-Chr6 12874863 12877978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1249 - K22846 cam:101506167 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1249 6 12874863 12877978 Tpr6g1249 6 12874863 12877978 ECH