Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1244 ATGAAAACTAGAATTTTGTTTCATTCCATGTCCCTAGCAGTTTCATCCTCACCAAAAAAATGGATGAGCAATTGTGTTAGAGTGCTTAACTCATTCATATGTTACCTTGTTTTCATCATCTTTGATCTTCTTGATGCTGTTTTATGCATTATCTATAGATACCTTGATGAGCGCATTGAAGGGGTAACTTCTCCTTGTTGTTGTTCTAAATGGGAGAGACAAGAAAAGAAGATTATGATGAATGATGAAGATGATGATCTTTCAGATAGTTTGTATGAAAGGAAGAGCATGTTTAGAAAAATGGGTTTGCTTCAATTTGGAAGAAAAAGAGAAGATTCCAATGGGAAATGTGGTGGAAGGAAAGTGAATTGTTGGTCTGATTGTGGGTGTGAGTCTTGTCTTTCATGGGTGAATGGTAGTGATGATGACTATAAACTTCATTTTGTTGTTAAGGAACCCTTATTAGCCACTAGTGAAAACTGCAGGGGAGACCCTTATGAGAATGTGATATTCTTGCATGGATTTATGTGTTCTTCATCATTTTGGACTGAGACAGTGTTTCCATGTTTCTCTGAAAATGTAAACCATAACTACAGATTAATTGCCATAGACCTATTGGGATTTGGCATGAGTCCAAAGCCAAGAGATTGTTTGTATACTTTGAAGGATCATGTCGAAATGATTGAGAAATCTGTGCTTCAACCATTGCATTTAGGTACTTTTCATTTGGTGGCACACTCTATGGGTAGTGTCATTGCATTGGCTTTGGCTGCAAAGTACCACAACTGTGTAAAGTCAATCACTCTTGTTGCACCTCCATACTCTTCTTTTGAGGGAAATGATGCTTGTTTGAATGCACTTGAAAAGTTTGCTGGAAAGAAATTGTGGCCAATGCTATCAGCTGGTTCTTCATTTATGTCATGGTATGAGCATTTGGGTCGAACTGTTTGTCTTATCTATTGCAGAAATCACAGGATATGGGAAAGGATTCTAAAATTCTTTACTCGAAAGAGGGATCTTAATTTCTTGATCACAGACATGACTAGACATACTCATCAATCTGCTTGGAGATCGATGCATAATGTGATATGTGGTGGAGCAAAATTCATGGATAGTTACTTGAAAATTTTGACAAAAAGTGGAGTTAGAATAAATGTTATACAAGGTGATAAAGATCAAGTTGTCCCAAGGGAATGCATTAGTAAATTCAAGTTGAAGGCTCCACATGCTGAAATTAACATAATTCCAAATGCAGATCATAGCACTGTGCTATTAGGCAGGGAGAAGAAATTTGCACAAAATTTGGAGCATACATGGGCATCTTGTTAG 1329 0.3695 MKTRILFHSMSLAVSSSPKKWMSNCVRVLNSFICYLVFIIFDLLDAVLCIIYRYLDERIEGVTSPCCCSKWERQEKKIMMNDEDDDLSDSLYERKSMFRKMGLLQFGRKREDSNGKCGGRKVNCWSDCGCESCLSWVNGSDDDYKLHFVVKEPLLATSENCRGDPYENVIFLHGFMCSSSFWTETVFPCFSENVNHNYRLIAIDLLGFGMSPKPRDCLYTLKDHVEMIEKSVLQPLHLGTFHLVAHSMGSVIALALAAKYHNCVKSITLVAPPYSSFEGNDACLNALEKFAGKKLWPMLSAGSSFMSWYEHLGRTVCLIYCRNHRIWERILKFFTRKRDLNFLITDMTRHTHQSAWRSMHNVICGGAKFMDSYLKILTKSGVRINVIQGDKDQVVPRECISKFKLKAPHAEINIIPNADHSTVLLGREKKFAQNLEHTWASC* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1244 442 PANTHER HYDROLASE 41 442 - -
Tpr6g1244 442 SUPERFAMILY alpha/beta-Hydrolases 142 422 IPR029058 -
Tpr6g1244 442 Gene3D alpha/beta hydrolase 139 441 IPR029058 -
Tpr6g1244 442 PRINTS Alpha/beta hydrolase fold signature 197 212 IPR000073 -
Tpr6g1244 442 PRINTS Alpha/beta hydrolase fold signature 243 256 IPR000073 -
Tpr6g1244 442 PRINTS Alpha/beta hydrolase fold signature 257 270 IPR000073 -
Tpr6g1244 442 Pfam alpha/beta hydrolase fold 169 285 IPR000073 -
Tpr6g1244 442 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 41 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1244 Tpr-Chr6 12843453 12845918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1244 16 442 Acyl Lipid Metabolism Gene Families AT5G17780 48.736 3.28e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1244 - - gmx:100775258 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1244 6 12843453 12845918 Tpr6g1244 6 12843453 12845918 ECH