Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1238 ATGGCAAAGAGCGCGGGTGAATTGTTTTCCATGGAGCACTTCTTCTTCTTCTACTTCTTCCTCATCATTTCTTCACTATCCGCCAGTGATGAAAATCAACATCACACTCTTCTCACTCTCAAAGGTGTTGATATTGAAAAACCAAATTTGGATGTATCGCCTTCCTTACTTTTAGTGAACTCTGATACTAAAGGCGTTAAAAAAAATTTGCGATGTGAGCGCGTTCAAGTTTCTGGTATCTCAAGATTGAAACTCGGGAGCTATGCCAATTCATACCATATTACTTTGGTTCCATCAGTTGCAATTCCAGAGAGATTACATAGCAAAATCAAGGTTTGTTTTCACAGGAATAATACTCTTGGATGGTGTCAGTGTGAAAAGGATGAATGGAAGGGTGTACAGAAGGGGGTGTGGGGTGCGGTTATGTCACCTTATGAAACTAGATACGTTGATGTCAAGATTGATGGTGAAATATCCGGTTCAGTTACAGTTGCACTTGAAGAAGGTTTTCAGCAATGGCGCCTAATTAGTCTTGCAGTTGGACTGTTACTGCTGTTGGTGGCTCCAATTGTTAGCAGTTGGGTTCCGTTTTATTATAGCAGTTCCATGGCTATTGGAATCTTTCTTGTCATTATAATTGTTCTTTTTCAGGGCATGAAATTATTGCCAACCGGAAGAAAAAATATCTTTTACCTTACCATATATGGATCAGTGCTTGGAGCTGGATCGTTCCTTTTGCACCAATTCTCTATGATCGTAAATTCAATTCTTCAGAGCTTTGGGATGAGTGAAGAGATGCACAATCCAGTTGCTCTTTTTGTACTACTGGGTATTATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTTAGGAGATTTGTTATTTCAAAAGAAGATGGTAGTGTGGATGCCGGGGTTGCTCAGTTTGTAAAATGGGCAATGCGCGTTATTGGGACTACCTTCATTTTGCAGAGCACTCTTGATACTCCTCTTGCAGTTGGAGTCTTGGTCTCTTGTGGAGCTGTTTGCAAAATTTGGTCATCAATAGAATTGCTTCATGGGTGGTATGAAACTTCAGGGAGTGATGATTATTCACTGGAGTGGGTGAGAGGAACTCGTGGTCGTGCTGAATTCCTTAGCAAGTCGCCTCCTAAAGGAAAAATGTGGAATAGCCCTAAAGTTGGCTCTAAAGGAAAATTGTGGAACACCCCTAAAGGGATGTCATGGTCTGACTCTCCCGTGAGAGCAATGTCTACTCAAGTAGAAGCAAACCCAACTCAAGAGGTGAATCAACATGAGCCTATAGATTCAACTCAAGCAGAAGCACACCCAACTGAAGCAAATGAAGATGAAGACCCAGTTCTTGGGAGAAAGAGGAAAAAAACAAGTAAAATTTGGGAGGATTTTGATTTAGTTAAAATTAAAGGTGTTATGAAAGGTGTACCGAAAAGGAAATTGCATATGAGTACCGAAAAGAGACAAACCACTATTCCATTTCAGCCTTCAAATGCAGTTAATCCCTTTATTGTTCCTGGTGCTAGATACTGTAACGAAAAGATGAGGGAAATAATGGCAACTGCTATGATGGTTCATGAGAATCCTTTTAATGCTGCCGAACATCAGATTTGGGTGTGGGCCTTCGAATATGCAAATTCTGAATTTCGCAAAGTTTCACATAAAACTGCAAGAAATGATTGTGTGGCACTATATGAGAAGGAGAAGAAAATTTTGAAGACACAATTGGAAAGTGTGAGCAAGATTAGTTTAACTACAGATATGTGGAGATCTAGCCACCAAGTAGTTGAATATATGGTCATAACAGGACACTTCATTGATGTAGGGTGGAATCTAAACAAAAGAGTTTTGAGTTTTGTGAAAGTGCCTGCACCTAGGCGTGGTATTGATGTTGCCGATGCGATTTATAAATGTTTGAAGACTTGGGGGATTGAAAATAAGGTTTTTTCAGTATCTGTTGATAATGCTTCTTACAACGATTCATGCCTAAGATGTCTCAAAGATAATTTATCTCTAACTGGTAAGTTGATCCTCGGAGGCTCATTGTTTCATGTTAGATGCTGTGCCCATATATTGAATTTGTTAGTGCAAGACGGCCTTAGTAAAATTAAGGACACTATTTTCAATATCCGTGAAAGTGTCAAATATATTAATCACAATGATGGAAGACTAAAGGCATTCTGCGACGTGGTAGAGCAAAAAGGTTTGAAAGAAAGGAAACTCATTATTGATTGTCCAACAAGATGGAATTCAACTTTTAATATGTTGTCTACTGCTTTGAAGTTCAAGATTGCATTTGCATCCTACCAAGAAAGAGAGCCTCATTATGATTTAGCCCCTTCACTTGAAGAATGGAACAAAGTTGAGAAAGTTTGTAAATTGCTAGAAGTGTTTAATTATGCTACTCATGTGATCTCAGGTAGTGAGTATCCGACTGCAAATTTGTATTTGGCTGAAGTTTGGAAGGTGAAAGTAATATTTGATGAGGCAGATGAAGATGCAGATCGCTTTATGAGAGAAATGGCAAGTCCAATGAAAGCAAAATTTGACAAATATTGGGGGGAGTGTAATCTGTTGATGGCTATTGCTAGTGTTTTGGACCCTAGGTGCAAGTTTCATATGGTGCGTATATGTTTTCCCAAGATATATAAATCTCAAGAAGTTGCCGATGAAAATATTAAGAAGGTCAGATCTTCATTGGATGAGTTATATGATGATTATGTAGCTCTATCTTTGGCAGATGCCTCTTCTTCTAATGGTAATTTGAATAGTAACACTCAATCATCCTCCCAAGCGAATGTTGCAGCTGTCAAAACTGGATTTGATGAAATTATGTGCCTTATTCAAGAAAATGTAGCTATTAGTCCAATGAAATCAGAATTGCAACAGTATCTTGATGAAGGTATTTACGTTCCTAACACTACCTCCTTTAGTGCTTTGGATTGGTGGAGGAACAACAGCATGAAATATAAAATCTTGTCTAAGATGGCTGCTGATATATTAGCAATTCCAATCTCAACTGTGGCATCTGAGTCCACATTCAGTGCCGGAGGTAGAGTTATTGATGAATTTCGCTCTAGATTAAGTGAAGAATCTGTTGAAGCTCTCATTTGTGGTGGGGATTGGTTTCGTCACAAGTATAATGTGACTAAAAATTCAAAGGTTGGAAAAGAGGAGATACAAGTCAACTTGAAGATTTGA 3216 0.3877 MAKSAGELFSMEHFFFFYFFLIISSLSASDENQHHTLLTLKGVDIEKPNLDVSPSLLLVNSDTKGVKKNLRCERVQVSGISRLKLGSYANSYHITLVPSVAIPERLHSKIKVCFHRNNTLGWCQCEKDEWKGVQKGVWGAVMSPYETRYVDVKIDGEISGSVTVALEEGFQQWRLISLAVGLLLLLVAPIVSSWVPFYYSSSMAIGIFLVIIIVLFQGMKLLPTGRKNIFYLTIYGSVLGAGSFLLHQFSMIVNSILQSFGMSEEMHNPVALFVLLGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRVIGTTFILQSTLDTPLAVGVLVSCGAVCKIWSSIELLHGWYETSGSDDYSLEWVRGTRGRAEFLSKSPPKGKMWNSPKVGSKGKLWNTPKGMSWSDSPVRAMSTQVEANPTQEVNQHEPIDSTQAEAHPTEANEDEDPVLGRKRKKTSKIWEDFDLVKIKGVMKGVPKRKLHMSTEKRQTTIPFQPSNAVNPFIVPGARYCNEKMREIMATAMMVHENPFNAAEHQIWVWAFEYANSEFRKVSHKTARNDCVALYEKEKKILKTQLESVSKISLTTDMWRSSHQVVEYMVITGHFIDVGWNLNKRVLSFVKVPAPRRGIDVADAIYKCLKTWGIENKVFSVSVDNASYNDSCLRCLKDNLSLTGKLILGGSLFHVRCCAHILNLLVQDGLSKIKDTIFNIRESVKYINHNDGRLKAFCDVVEQKGLKERKLIIDCPTRWNSTFNMLSTALKFKIAFASYQEREPHYDLAPSLEEWNKVEKVCKLLEVFNYATHVISGSEYPTANLYLAEVWKVKVIFDEADEDADRFMREMASPMKAKFDKYWGECNLLMAIASVLDPRCKFHMVRICFPKIYKSQEVADENIKKVRSSLDELYDDYVALSLADASSSNGNLNSNTQSSSQANVAAVKTGFDEIMCLIQENVAISPMKSELQQYLDEGIYVPNTTSFSALDWWRNNSMKYKILSKMAADILAIPISTVASESTFSAGGRVIDEFRSRLSEESVEALICGGDWFRHKYNVTKNSKVGKEEIQVNLKI* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1238 1071 Pfam NEMP family 164 389 IPR019358 -
Tpr6g1238 1071 MobiDBLite consensus disorder prediction 403 442 - -
Tpr6g1238 1071 Pfam hAT family C-terminal dimerisation region 965 1047 IPR008906 GO:0046983
Tpr6g1238 1071 SUPERFAMILY Ribonuclease H-like 574 1050 IPR012337 -
Tpr6g1238 1071 Pfam Domain of unknown function (DUF4413) 811 912 IPR025525 GO:0003677
Tpr6g1238 1071 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 14 415 - -
Tpr6g1238 1071 MobiDBLite consensus disorder prediction 443 459 - -
Tpr6g1238 1071 PANTHER EXPRESSED PROTEIN 14 415 - -
Tpr6g1238 1071 MobiDBLite consensus disorder prediction 383 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1238 Tpr-Chr6 12794630 12802918 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1238 - - gmx:106794198 865.144