Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1218 ATGGGTATCAAAATATTCATGTTTTCTTTCATAATAACCTCAATATTATTCTTTTTTCTCTTTATACCAACAAGATTAACCACTCAAATCTCAACCTTAAAACCTAGTACTATGAACTACTTCAATGTCATAACAACCAACAAAACATATCCAATTACTTTTGCTTACTTAATCTCAGCATCAAAAGGAGATGTTGTAAGACTCAAAAGGTTACTTAAAGTGTTGTACCATCCAAATAACTATTATTTGATTCACATGGATTATGATGCTCCAGATTCAGAACATAAAGATGTGGCAGAATATGTTGCTAATGATCATGTTTTTGGTCAAGTTGGGAATGTTTGGATTGTTGGAAAGCCTAATTTGGTAACTTATAGAGGACCAACTATGCTTGCAACTACTCTTCATGCTATGGCAATGCTTCTTAGGACATGTCATTGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCTTTGGTCACACAAGATGATCTGATTCAAGTTTTCTCTGAGGTGCCAAGGGATATTAATTTCATACAACATAGTAGTCACTTGGGTTGGAAACTGAATAAGAGAGGGAAGCCAATGATCATAGATCCTGGACTTTATAGCCTCAATAAATCAGAAATTTGGTGGATCATTAAGCAAAGAAATTTGCCAACATCTTTTAAACTATACACAGGCTCAGCTTGGACAATAGTATCAAGATCATTCACTGAGTATTGCATAATGGGATGGGAAAATCTACCAAGAACTCTACTCCTCTATTACACAAACTTTGTCTCATCACCAGAAGGATATTTCCAAACAGTAATATGCAACTCACAAGGCTACAAAAACACCACTGCCAACCATGATCTTCACTACATTACTTGGGACAATCCTCCAAAACAACATCCTAGGTCTCTAGGACTTAAAGATTATAGGAAAATGGTTTTGAGTAGCCGTCCGTTCGCGAGAAAATTCAAGAGAAATGATATTGTTCTTGATAAAATTGATAGAGATCTTTTGAAGAGGTATAAGGGAGGATTTTCTTTTGGTGGATGGTGTTCTAAGGGCGGAAAGAACAAATCATGTTCGGGTTTGAGAGCCGAGAATTATGGTTTGCTTAAACCTGGTCCTGGTTCAAGAAGGCTAAAAAATTTGTTAAAGAAAATTCTCGCGGATAGATTTTTTCGCCAAATGCAGTGTAGGTAA 1200 0.3575 MGIKIFMFSFIITSILFFFLFIPTRLTTQISTLKPSTMNYFNVITTNKTYPITFAYLISASKGDVVRLKRLLKVLYHPNNYYLIHMDYDAPDSEHKDVAEYVANDHVFGQVGNVWIVGKPNLVTYRGPTMLATTLHAMAMLLRTCHWDWFINLSASDYPLVTQDDLIQVFSEVPRDINFIQHSSHLGWKLNKRGKPMIIDPGLYSLNKSEIWWIIKQRNLPTSFKLYTGSAWTIVSRSFTEYCIMGWENLPRTLLLYYTNFVSSPEGYFQTVICNSQGYKNTTANHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNDIVLDKIDRDLLKRYKGGFSFGGWCSKGGKNKSCSGLRAENYGLLKPGPGSRRLKNLLKKILADRFFRQMQCR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1218 399 Pfam Core-2/I-Branching enzyme 54 312 IPR003406 GO:0016020|GO:0016757
Tpr6g1218 399 PANTHER GLYCOSYLTRANSFERASE 1 398 IPR044610 GO:0015020
Tpr6g1218 399 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1218 Tpr-Chr6 12435842 12439712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1218 4 399 Glycosyltransferase AT4G27480 50.597 3.11e-151 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1218 - - gmx:100812712 673.7