Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1213 ATGACTGACCTCTTGAGTTCATTGGTTACAGATCCTAATGGGATGAGGGTTGCAGTGAACATGGAACAGAATATTCACTGTCTGGAAATTCATGCTTACAGTTCCTTGTTGAAGGCTTTTATTGCTCAATCAGAACTTCTTACTTGGGGAAAAGAGGAGCTCTTGACTGAAATACGGAAGGAACTACGTATTGCAGATTCTGAACATGGAGAAATTCTGACTAGAATAAACTCTGATGAGACTGTTAAATGGATAAGGGAGCAAAGGAAAATGGCATCTCATTCTCATGCTCAGGCTTATAATAATGCTAATACTACTGGGTGTCCGTCTGCTCCAATTGGAAATTCAGTTATAAGATTGAAAGCTCCACCCTCCATTGCATCTTATCCTCGGAAGAACATACCGCACAGCCAAGATTCTCTGAGTTCTATTCAAATTCCTTCTTCAATGCCTCTGAGTAAAATAGGCCGCAATGTAACTGTGCTGAAGTATAATGACAATCTGACGACTGTGCAATTCGTCCATGGGAATGCTGAGCCACCCAAGGAAATGTTCAATTATGATGCTCAGTTATCGCCTATTGGAAGAGGGAGTGTGCCGAAAGGAAACTGTCAATTTGTCCATGGGAGTGTTGAGCCACCAAAGGAAATGTTCAACTATGATGCTCAGTTACCGCCGCCTGGTGGAAGAGAGAGTATGGCGAAAGGAAACTGTCAATTTGTACATGGGAATGCTGAGCCACCCAAGGAAAAGTTCAATTATGGTGTTCAGTTACCGCCTAGTGGAAGAGGGAGTGTGCCGAAAGGAAACTATCATAATAAGCAGCCCTTTCACCCATCCGAGCCTCCCATGTTAAACAACAAATCTGATGTAATTCGGCTTCGTCCAACACACAGGGTTATCCATGGGGTTGAGAATATGCTTTTCAACAGAGAGAATCCTGAACCAGTTGCCATCGAGAGAGCGAAACAGACTCTTCATGAGCAAGAAAGAGATTTACTTGAAGCAATCGGTAAACTGGAGAATGTGTTAGAAGATGATGACGAGGCACCGCAAAATCTTCAAAACGACTCAGGGAGGACAAGAAATGATGGTCCGTGCCGTGGTAATATCAGTTGA 1119 0.4325 MTDLLSSLVTDPNGMRVAVNMEQNIHCLEIHAYSSLLKAFIAQSELLTWGKEELLTEIRKELRIADSEHGEILTRINSDETVKWIREQRKMASHSHAQAYNNANTTGCPSAPIGNSVIRLKAPPSIASYPRKNIPHSQDSLSSIQIPSSMPLSKIGRNVTVLKYNDNLTTVQFVHGNAEPPKEMFNYDAQLSPIGRGSVPKGNCQFVHGSVEPPKEMFNYDAQLPPPGGRESMAKGNCQFVHGNAEPPKEKFNYGVQLPPSGRGSVPKGNYHNKQPFHPSEPPMLNNKSDVIRLRPTHRVIHGVENMLFNRENPEPVAIERAKQTLHEQERDLLEAIGKLENVLEDDDEAPQNLQNDSGRTRNDGPCRGNIS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1213 372 PANTHER OS10G0436850 PROTEIN 238 356 - -
Tpr6g1213 372 PANTHER OS10G0436850 PROTEIN 2 206 - -
Tpr6g1213 372 Pfam ENT domain 23 89 IPR005491 -
Tpr6g1213 372 SMART ENT_2 21 94 IPR005491 -
Tpr6g1213 372 MobiDBLite consensus disorder prediction 354 372 - -
Tpr6g1213 372 Gene3D ENT domain 18 122 IPR036142 -
Tpr6g1213 372 PANTHER PROTEIN EMSY-LIKE 4 2 206 IPR033485 GO:0050832
Tpr6g1213 372 PANTHER PROTEIN EMSY-LIKE 4 238 356 IPR033485 GO:0050832
Tpr6g1213 372 SUPERFAMILY ENT-like 17 107 IPR036142 -
Tpr6g1213 372 Coils Coil 319 346 - -
Tpr6g1213 372 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 21 108 IPR005491 -
Tpr6g1213 372 MobiDBLite consensus disorder prediction 343 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1213 Tpr-Chr6 12385659 12389679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1213 - - ccaj:109802952 192.971