Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1211 ATGGGTGTCTCTGTTGATTCACCATCACAAAAGGGTTCATGGAAATTTTTCACTAGAAGGAAGCAAGTTGATTCTGCACGTAAAAACACTAACACTCTACTTGCAAAGGAATTAACTGTTTCTCATCTCATTGCAATTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTTTGGTTGGAACAGTAGCTAGAGAGCATTCTGGACCAGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGGTCTTTCTGCCTTTTGCTATGCCGAGTTAGCTTGTCGTTGTCCTTCTGCTGGAAGTGCATATCACTACTCATACATATGTCTTGGAGAAGGTGTTGCTTGGTTGATCGGTTGGGCCTTGGTATTGGAATATACGATTGGTGGCGCTGCTGTTGCTCGTGGCATAACCCCCAATCTTGCTCAACTTTTTGGTGGTCTGGACAATGTACCATTCTTTTTGTTGCGCCAGCATATTCCTGGGATTGATATTGTTGTGGACCCATGTGCAGCAATTTTGGTATTTCTTGTTACAGGACTCCTATGTTTGGGGATCAAGGAGAGCACAGTGGTACAAGGCATAGTAACATCAGTGAATGTATGTGCATTGCTTTTTGTGATAGTAGCTGGTGGTTACATAGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTACTGGGTATTTTCCCTTTGGAGTTGATGGGATGCTTGCTGGTTCGGCAACAGTCTTCTTTGCATATGTAGGTTTCGATGCAGTTGCCAGCACTGCCGAAGAGGTGAAAAATCCTCAACGAGATTTGCCATTGGGTATCGGTGTTTCATTGTTTCTATGCTGTGGAATGTATATGTTGGTTTCCATTGTTGTGGTTGGTTTAGTACCTTATTATGCAATTGATCCCGATACCCCAATATCCTCTGCATTTTCTGACCATGGAATGCAATGGGCGGCTTACATTATAAATGTTGGAGCTTGCACAGCTCTCTGCTCGGCATTGATGGGTGGAATACTTCCCCAGCCACGGATTTTGATGGCTATGGCAAGGGATGGACTACTGCCACCATTTTTTTGTGACATAAATAAGCACACTCTAGTTCCTGTCAAGGGCACAGTAATTACTGGCCTAGCAGCTGCAGTCTTAGCATTTTCTATGGAAGTCTCTGAACTTGCAGGAATGGTTAGTGTTGGTACGCTTTTAGCATTCACCATGGTGGCAATATCTGTGCTGATCCTAAGATATATTCCTCCAAATAAAGTCCCAGTGCCTCCTTCTCTCCAGGGTTCAATTGCAGAGATCAATGTGGAATATGTAGGGGAAAATATCAGTACTTCTGAAGACACAAAACCTTTGGATGTTGTACACGATTTTCCCGTTGATTATCCCCTTATTTCTAAATACCTTGCCATAGATACGTATCTAAATGAGGGTAACAGAAGAAGAGTTGTGGAGTGGACTATAGCATTCATATGCTTAGGGGCATTTCTCCTTACATTTGCAGCTTCTTGTTTAACTCTTAGCTCTGTTCGCTTTGCATTGTGTGGAGTTGGAGGCGTTCTTCTTGTGTCTGGATTCGTCTTCCTAACCTGTATAGATCAAGATGAAGCAAGGCATGACTTTGGTCACTCTGGAGGTTTTGTATGCCCATTTGTGCCACTGCTGCCTATTGCATGCATTCTCATCAATTCCTACCTACTCATTAATCTTGGAGTGGGAACATGGTTGCGTGTTTCTGTATGGTTGGTAGCAGGACTACTAATTTATGTGTTTTATGGACGAACTCATAGTTCTCTAAAAGATGCAATTTATGTGCCAGTAAGTCAAGTGGACCAAACTTATCAAGCTCCCAGAAGCCATCTTGCTTAA 1869 0.4291 MGVSVDSPSQKGSWKFFTRRKQVDSARKNTNTLLAKELTVSHLIAIGVGSTIGAGVYVLVGTVAREHSGPALAISFLIAGLAAGLSAFCYAELACRCPSAGSAYHYSYICLGEGVAWLIGWALVLEYTIGGAAVARGITPNLAQLFGGLDNVPFFLLRQHIPGIDIVVDPCAAILVFLVTGLLCLGIKESTVVQGIVTSVNVCALLFVIVAGGYIGFKSGWVGYELPTGYFPFGVDGMLAGSATVFFAYVGFDAVASTAEEVKNPQRDLPLGIGVSLFLCCGMYMLVSIVVVGLVPYYAIDPDTPISSAFSDHGMQWAAYIINVGACTALCSALMGGILPQPRILMAMARDGLLPPFFCDINKHTLVPVKGTVITGLAAAVLAFSMEVSELAGMVSVGTLLAFTMVAISVLILRYIPPNKVPVPPSLQGSIAEINVEYVGENISTSEDTKPLDVVHDFPVDYPLISKYLAIDTYLNEGNRRRVVEWTIAFICLGAFLLTFAASCLTLSSVRFALCGVGGVLLVSGFVFLTCIDQDEARHDFGHSGGFVCPFVPLLPIACILINSYLLINLGVGTWLRVSVWLVAGLLIYVFYGRTHSSLKDAIYVPVSQVDQTYQAPRSHLA* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1211 622 Gene3D Amino acid/polyamine transporter I 34 432 - -
Tpr6g1211 622 Gene3D Amino acid/polyamine transporter I 466 611 - -
Tpr6g1211 622 PANTHER PROTEIN, PUTATIVE-RELATED 9 613 - -
Tpr6g1211 622 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 613 - -
Tpr6g1211 622 PIRSF AA_transporter 16 426 - -
Tpr6g1211 622 PIRSF AA_transporter 470 606 - -
Tpr6g1211 622 Pfam C-terminus of AA_permease 547 597 IPR029485 -
Tpr6g1211 622 Pfam Amino acid permease 41 420 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1211 Tpr-Chr6 12347935 12353932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1211 12 622 Organic Solute Cotransporters AT5G36940 65.913 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1211 K13863 - gmx:100784895 1003.43