Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1210 ATGATTGTGCAAGGTGGTGATGGAGAAAGAGAAAGAGGGTGGTTTAGAGAATTTGGAAGCTTGATTAGGAGAAAACAAGTTGATTCTGTTCATTATAGAGGACATCCTCAATTGGCTAGGAAATTATCTGCTGTTGATCTTGTTGGAATTGGGGTTGGAGCTACTATTGGAGCTGGAGTGTATATTCTGATTGGAACAGTTGCTAGGGAGCAGGCAGGACCGGCACTTGTAATATCGCTCTTTATTGCAGGAATAGCTGCTGCACTATCAGCTTTGTGTTATGCAGAACTTGCTTGTCGATGTCCTTCGGCAGGGAGTGCTTATCATTATACTTACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTAGGTTGGTCCCTGATTCTAGAATATACAATTGGTGCTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGCTTTGTTTTTTGGAGGTCAAGACAACCTACCTTCGTTTCTGGCTCGTCATACCTTGCCAGGTCTTGGGATAGTGGTTGATCCATGTGCAGCTGTATTAATTATTCTTATTACCCTCCTCTTGTGTCTTGGAATCAAGGAGAGTTCAACGGTACAATCGATTGTGACAACAGTAAATGTCTCTGTCATGCTTTTCATCATCATAGTTGGTGGTTATCTAGGTTTTAAAACCGGATGGGTTGGTTATGAACTCCCTAGCGGGTATTTTCCATATGGAGTGAATGGGATGTTTTCTGGGTCTGCGATAGTTTTCTTTTCATACATTGGTTTTGATTCAGTGACCAGCACCGCTGAGGAGGTCAAAAATCCTCAACGAGATTTGCCAATTGGCATATCAACTGCATTGGCTATATGTTGCGTTTTGTATATGCTTGTATCAGCAGTTATTGTTGGCTTAGTACCGTATTATGCGTTGAACCCTGATACCCCAATCTCTTCAGCATTTTCTAGCTATGGGATGGAATGGGCAGTGTATATAATAACAACTGGAGCTGTCACTGCACTTTTTTCCAGTTTGTTGGGATCAGTTCTTCCTCAGCCACGAGTCTTTATGGCAATGGCTAGGGATGGTTTGTTGCCCTCCTTCTTCTCGGATATCCATAGGAGCACGCAGATTCCTTTGAAAAGCACTATTGTCACTGGTCTCTTTGCTGCTGTTCTTGCATTCTTTATGGATGTTTCTCAGTTAGCAGGGATGGTTAGTGTGGGAACATTGCTTGCATTTACCACAGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCGCCTGATGAAGTACCGATTCCAACTTCACTTCTAACATCTGTGGATCCATTATTGAGGCATTCTGGTGATGGTATTGAGGAAGATGTGACCATAAGTCCTGTAGGTCTTGCTAGTTATTCTTATAATAATGACTTACATGACAAATCAGACGTTCTGCTTGAACATCCTCTGATCATAAAAGAAGCAACTAAAGAGCAACGTAGTGAGAAGTCTAGGAGAAAACTTGCTGCATGGACGATATCCCTTCTATGTATAGGGATTCTCATAGTTACTGGTTCAGCTGCAGCCGAAAGGTGTCCCAGGCTTTTGCGCGTAACGTTGTTTGGAGTGGGTGTAGTTATTCTTTTGTGCAGCATAATTGTGCTGGCCTGCGTAAAGCAAGATGATACCAGGCACACGTTTGGACACTCAGGAGGTTTTGCTTGCCCTTTTGTTCCATTCTTACCTGCTGCCTGCATTCTTATAAACACCTACTTACTAATTGATCTTGGGGTTGCTACATGGCTAAGAGTTTCTGTGTGGTTGTTAATTGGATTACTAATTTACTTGTTCTATGGCCGAACTCACAGTTCATTGTTAAATGCAATCTATGTTCCTTCAGCCCGTGCAGATGAGATCCATCGTACTCACGCGAATCATTTAGCCTAG 1911 0.4265 MIVQGGDGERERGWFREFGSLIRRKQVDSVHYRGHPQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLFIAGIAAALSALCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGQDNLPSFLARHTLPGLGIVVDPCAAVLIILITLLLCLGIKESSTVQSIVTTVNVSVMLFIIIVGGYLGFKTGWVGYELPSGYFPYGVNGMFSGSAIVFFSYIGFDSVTSTAEEVKNPQRDLPIGISTALAICCVLYMLVSAVIVGLVPYYALNPDTPISSAFSSYGMEWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPSFFSDIHRSTQIPLKSTIVTGLFAAVLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPTSLLTSVDPLLRHSGDGIEEDVTISPVGLASYSYNNDLHDKSDVLLEHPLIIKEATKEQRSEKSRRKLAAWTISLLCIGILIVTGSAAAERCPRLLRVTLFGVGVVILLCSIIVLACVKQDDTRHTFGHSGGFACPFVPFLPAACILINTYLLIDLGVATWLRVSVWLLIGLLIYLFYGRTHSSLLNAIYVPSARADEIHRTHANHLA* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1210 636 Pfam Amino acid permease 42 424 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tpr6g1210 636 PIRSF AA_transporter 486 618 - -
Tpr6g1210 636 PIRSF AA_transporter 17 428 - -
Tpr6g1210 636 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 15 629 - -
Tpr6g1210 636 Pfam C-terminus of AA_permease 561 611 IPR029485 -
Tpr6g1210 636 Gene3D Amino acid/polyamine transporter I 483 622 - -
Tpr6g1210 636 Gene3D Amino acid/polyamine transporter I 38 436 - -
Tpr6g1210 636 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 15 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1210 Tpr-Chr6 12340985 12346511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1210 18 636 Organic Solute Cotransporters AT3G03720 64.791 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1210 K13863 - gmx:100810218 1052.74