Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1188 ATGGCGATGAAACTCAAGTATCTTTCCTCCATTGCAGAGGAAGTTGTAGCAAAATGTTCACAGAAAATCGACATGTCGGTGGAGAAATTGGTGGAAGATTTTGAAAAAAGATGGACACCTGATGAAGGAAATTACTGCAAAAATTTAGTTGAATTTTGTAGTGGGAAGGCTCTGACTCAAATGTGTCGCAACATAGGTGAAGAAATCAATAATGGTTCTTTTGGAAGGTTATCCTATGATATCATGCTTGCTTGGGAGAGACCTACCTACTATGATGATGATGAGTATATGGAAGCTGAAGCAAAGGAGAAAGAAGAAAAGAAATCAACTGTGAAAACCACACAAGAACAGGATGATATATCTCTTTTTTATTCAGACATCATGCCCCTCCTTGTTAGTAATGATCCAACTGTTGGAGAGGATGCGTTTGTATGGTTGGGATCATTAGTTCCATTAGTTGCAGATGTCGCAAATGGAAGGTTCACTTTCGAAACTTTAACAGCATCGACAGGCCTCCGACTACATTTTCCAGCATACGACATGTTCTTGAAAGAAATGGAGAAGTGCGTAAGACATTTGCAGAAACAGGCAACACCAACTGGCGTGGAACTAGCGGAAGATGAATGTATATTACATGTAGAAGGAACAGCCAGCTCTCAGCGAGTCATTCGTCACATTGGAACAACAAGTTGGCCTGGTAGGCTTACACTGACCAATTACGCTCTTTACTTTGAGGCTTCGGGAGTAATAAAGTATGACGATGCTCTCAAAATAGACCTATGTAATGATGCCGAGCAGAGTGTTAAACCAACTGCCACAGGTCCATGGGGAGCCCAACTTTTTGACAAGGCCATAGTCATTGAATCAACTGATTTATCAGAGGCGGTTGTGCTGGAGTTTCCGGAGCTTACAAGTTCCACAAGACGTGACCATTGGATGGCATTGATAAGGGAAATAATGTTCCTCCATCAGTTTTTATCAAAGTACAACATAAATTGCCCAATACAAACATGGGAGATGCATGCAAGGACAATATTAGGAATCATAAGGCTTCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTTCCAACAAAATTCTTAATATTTTCCTTATATGACGAAATACCGAAGGGTGATTATGTGCTTGAAGAGCTTCCTGATAGCCTCAGAAAGGTTAATAGTGGAAAGCAATGTAGTGCAAGTTCTATCCTTAAGAGTATGCACATTGACGGACCAGTAGTTTCCAATACGACACTAGAAGAGGCGAGTCAAGTAGATAAAAGTGTCCCTGTTAGAGGTGATAGTCCCTCGTTGGATTCAGCTATTAAACAATCTAGGGAGGAAGAAAAGAGAGTTCTCGTTGCTAAAGCTACCACTGAAGAGTTAAAGGATGAAGGAGTCACTGACAGTGTTCTTGTTCTAACGGAACTACTAAAGCCACTTCAAAATGCTGTCCCTTGGTTACAAAAAATCTTCACATGGGAAAAACCAATAGCTACCGTTGCTGTTCTGGCTGCATCCCTAATAATCACTTATATGGAATGGGTTGGAAAAACAGCTGCAGCTTTCTTGGTTTGGGTGATAATAAAAATGCTTAAGGCAAGAGAGGAAAAGCTTAATGAAAAATGCAATGAGATAGTAATCAGTAGATCCAATATGGCTTCTGATCAATCTACAATGGATAGTATTGTCTCAGCCCAACATGGATTATACACTGTTCATGAAATGATGCAGATAGCTAACATAGCAATGTTAAAGATATGGTCTATACTTATTTCCAAGGCTGATAAGCATGCAAATGCAGTGATGGTAGCAATGGGTGGATTAGCATTCTTATTAGCAGTAATTCCATTCAAATTCTTCCTAATGGGTCTCATTGTGCAAAGTTTCACCATGAATTTAAAGACAAGCAACAAGTCTAATTCAGGAACTGGGAATAGAAGGTTGAAGGAATGGTGGGACTCAATACCAATTGTCCCTATCCGTGTAGTAGACAATGATCCTAACACTCGATGTGCTAAATAA 2031 0.3998 MAMKLKYLSSIAEEVVAKCSQKIDMSVEKLVEDFEKRWTPDEGNYCKNLVEFCSGKALTQMCRNIGEEINNGSFGRLSYDIMLAWERPTYYDDDEYMEAEAKEKEEKKSTVKTTQEQDDISLFYSDIMPLLVSNDPTVGEDAFVWLGSLVPLVADVANGRFTFETLTASTGLRLHFPAYDMFLKEMEKCVRHLQKQATPTGVELAEDECILHVEGTASSQRVIRHIGTTSWPGRLTLTNYALYFEASGVIKYDDALKIDLCNDAEQSVKPTATGPWGAQLFDKAIVIESTDLSEAVVLEFPELTSSTRRDHWMALIREIMFLHQFLSKYNINCPIQTWEMHARTILGIIRLHAAREMLRISPPVPTKFLIFSLYDEIPKGDYVLEELPDSLRKVNSGKQCSASSILKSMHIDGPVVSNTTLEEASQVDKSVPVRGDSPSLDSAIKQSREEEKRVLVAKATTEELKDEGVTDSVLVLTELLKPLQNAVPWLQKIFTWEKPIATVAVLAASLIITYMEWVGKTAAAFLVWVIIKMLKAREEKLNEKCNEIVISRSNMASDQSTMDSIVSAQHGLYTVHEMMQIANIAMLKIWSILISKADKHANAVMVAMGGLAFLLAVIPFKFFLMGLIVQSFTMNLKTSNKSNSGTGNRRLKEWWDSIPIVPIRVVDNDPNTRCAK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1188 676 Pfam Plant protein of unknown function (DUF639) 439 667 IPR006927 -
Tpr6g1188 676 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 3 668 - -
Tpr6g1188 676 Coils Coil 97 117 - -
Tpr6g1188 676 PANTHER ARGH (DUF639) 3 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1188 Tpr-Chr6 12024831 12029938 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1188 - - gmx:100783299 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1188 6 12024831 12029938 Tpr6g1188 6 12024831 12029938 ECH