Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1185 ATGGCGGAACAAACCACAGAAAAATCACGCCGAGAACGAAGGAAAGAATCCCGTTTGGCAAAGAAAACATCCAAATACCAATCTTGGCTTCAACACCAGAAATCTGAATCTATTAAAAAAAGTACCAATCAAGATCCAGAGTTAGAACCTGAAAGCAAATTGGACCAATCAGTTAGTCCTAGTCTCAATGAAACACAAGTTGTGAAGAAATTGAAATCTTTGTCTGAGAAACAAGTGGCAGCTGAAGAACATGCCTTGTCAGAAGATGAAACTTGTGACACTGTTGTAAGGAAAGTGAAGAAGAGTTCTAAAACAAGTTCCAAGAAGAAGAGGGTTGAGTTGGGTGTGTCGGAGATTTCGTTCGCTGCCCAAAAGGATTTAGAATTGGAAAGAAAACTCTCGAAGAGGCTTAAGGTGAAAGAAGGAAAATTGGGGGGATTGGATGATGGATTGAACTTGTTATTTGAAGGATTTCCGTCTGGTGATGATTTATTTGGAGATATGGAGGATCTTGATACTGATGAATTACCAAAAAGGAAGTCGAAGAAGAGCACGTTGAGTAAGAAGCAGAAGTTGTCAAAGAAAGGGGTGGAAGCAAAGTCATTATATGGCGCATCGGGACCTGTGGAAGCTCCTGATCAAGATGTAGCATTTGAAGAAGTTCCCGATAGTGAAACTTCCAGGAAGAAGAAGAATAAGAAAAGAAAGTTGGCGAATCAAGAGCAGGAAGATGTTTGCATAGTCAAACCTGTGGAATCCTGTGGAACAGATGCGACATCAGGGGATGTTGCTGCTGAAGTTTCTGAGAAGAAAGAGAAAGGAAAATATATAGCACCTCACTTGAGAGCTCGTGCTGGCAATGAACCTGAGGAGCATACTCAAATTCGAAGACGTGTACGAGGCCTTCTTAACAGGATTTCTGAATCAAATGTTGAGTCAATTACTGGAGAATTGTCCTTGATCTTTCAGTCTGTTCCTCGTAGTGTTGCTTCACAGATTATGATTGAGGAGACTTTAGCATCATGTTCTGGAGGCCCCCGTGGCAATAAACAATATGCTGCTGTGTTTGGTGCATTTGTTGCAGGGATGGCCTGTTTGGTTGGTATGGACTTCGGTGCAAAGTTTATGGCTTCCTTTGCCAAATGCTTTGAGGATGAGTATCATAAACAAGACAATCTCTCCTTGCGGAATATTGCTCTTCTCTTATCATATTTATGTATATTTGGAGTCTGTTCTAGTGATTTAATATTTGACTTTCTAATCATGCTGAGCAAGCGTTTGACCGAGGTGGATGTCTCTATTATTTTGACTGTGCTACAAAGTTGTGGGATGAAAATAAGGGCTGATGATCCAACTGCCATGAAAACGTTCATTCTTAATATTCAGGATACGTCAAATAAGATGAAGGCTTCCTCTGGAGATGTCCCTGAAAAGAATAACAGCAAAAGAATGGAGTTCATGCTTGAAACCATATATGATATCAAGAACAACAAGAAAAAGACAGAAGAGGTTAACCCTCGAATTAAAAAGTGGCTACAGAAGTTAAGAGTTGATGATATTTCAATTAGAGGGCTTACATGGAGTAAGTTACTTGATCCGGACAAGAAGGGCCAATGGTGGTTGTCTGGAGATGTGGTTTCTGCTACCGATAATGTTAAAAATATTGAAGATGTGGCTAACAAAATAGACAAAGATGTTGCTGAAACCCAACGAATGCTGCAGCTTGCTGCTGCTCAAAGGATGAACACAGATTCCAGAAGGGCAATATTTTGTATAATAATGTCTGGGGAGGATTACATTGATGCATTTGAAAAGCTTCTAAGATTGGAACTACCAGGCAAGCAGGACAGAGATATAATGCGGGTTCTTGTTGAATGTTGCTTGCAAGAGAAAGTTTTTAACAAGTACTATACAGTGCTGGCTTCCAAATTGTGTGAGCATGACAAAAATCACAAGTTTACTCTACAGTTTTGCTTATGGGACCACTTTAAGGAGCTGGAGTCTATGGCTCTTTCGAGATCAATGCACCTGGCAAAATTTGTGGCTGAAATGGCTGCATCTTTTACTCTCTCCCTTACGGTTTTGAAGACTGTGGATCTGAGTGATATCACCCAGCTAACCCCAAAAAGGATTATGCATTTTCGCATTCTGTTTGAGGCCATTTTCGATTATCCTGACACCGTGGTGTGGAAGATATTCACACGTATAGCAGGGACCCCTGAACTTGAAAGTTTTAGACAGGGCATTGAGTTTTTCATTAAGGAATACATTTTGAAAACAAATAAAGCTGTATCTCAAAAATTTAAGTTGGCAAAAAGAGCCCTTAATAATATTGAAGGAGTCCTGATGCAAGAGTAA 2358 0.4012 MAEQTTEKSRRERRKESRLAKKTSKYQSWLQHQKSESIKKSTNQDPELEPESKLDQSVSPSLNETQVVKKLKSLSEKQVAAEEHALSEDETCDTVVRKVKKSSKTSSKKKRVELGVSEISFAAQKDLELERKLSKRLKVKEGKLGGLDDGLNLLFEGFPSGDDLFGDMEDLDTDELPKRKSKKSTLSKKQKLSKKGVEAKSLYGASGPVEAPDQDVAFEEVPDSETSRKKKNKKRKLANQEQEDVCIVKPVESCGTDATSGDVAAEVSEKKEKGKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRISESNVESITGELSLIFQSVPRSVASQIMIEETLASCSGGPRGNKQYAAVFGAFVAGMACLVGMDFGAKFMASFAKCFEDEYHKQDNLSLRNIALLLSYLCIFGVCSSDLIFDFLIMLSKRLTEVDVSIILTVLQSCGMKIRADDPTAMKTFILNIQDTSNKMKASSGDVPEKNNSKRMEFMLETIYDIKNNKKKTEEVNPRIKKWLQKLRVDDISIRGLTWSKLLDPDKKGQWWLSGDVVSATDNVKNIEDVANKIDKDVAETQRMLQLAAAQRMNTDSRRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMALSRSMHLAKFVAEMAASFTLSLTVLKTVDLSDITQLTPKRIMHFRILFEAIFDYPDTVVWKIFTRIAGTPELESFRQGIEFFIKEYILKTNKAVSQKFKLAKRALNNIEGVLMQE* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1185 785 ProSiteProfiles MI domain profile. 584 700 IPR003891 -
Tpr6g1185 785 MobiDBLite consensus disorder prediction 1 62 - -
Tpr6g1185 785 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 2 781 - -
Tpr6g1185 785 MobiDBLite consensus disorder prediction 82 109 - -
Tpr6g1185 785 SMART if4_15 296 498 IPR003890 GO:0003723|GO:0005515
Tpr6g1185 785 MobiDBLite consensus disorder prediction 82 100 - -
Tpr6g1185 785 Gene3D - 263 558 - -
Tpr6g1185 785 MobiDBLite consensus disorder prediction 169 241 - -
Tpr6g1185 785 MobiDBLite consensus disorder prediction 23 37 - -
Tpr6g1185 785 Pfam MIF4G domain 297 498 IPR003890 GO:0003723|GO:0005515
Tpr6g1185 785 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g1185 785 Pfam MA3 domain 586 686 IPR003891 -
Tpr6g1185 785 SMART ma3_7 585 691 IPR003891 -
Tpr6g1185 785 MobiDBLite consensus disorder prediction 38 52 - -
Tpr6g1185 785 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 2 781 - -
Tpr6g1185 785 SUPERFAMILY ARM repeat 289 499 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1185 K17583 - gmx:100778579 1040.8