Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1179 ATGGAAAGCAAGCATGCACATAATCGGACTTATGAGGATTTTGATCCTATTTATAAGTGGCGTAGAGAACAAGGCAGTGACACCGTTGAACTTCATCTTCCAGGTTTTAAGAGAGAGCAAATACGAATTCAGATAAACCATCTTGGTTTTTTGGTGATAAGTGGAGAACGTCCATGTGATGGAACAAAATGGAAACGTTTCAAGAAAGAATTTGAACTTCCAAAATATTGCAATGAAGATGCTATTCGTGGCAATTTCATGCAAAACATTCTTTCAGTTGTAATGCCAAAAAAAGTTGATTTAATACCTCAAGAGGAGCTAGTAGAAGAACAAATGCCAGAACTTGAAGATGTTGATGATTATAAATATCAAGAGAAAAAGACATTTCAGAGTTTGAAATTTGGAGGAAGAAACATAGAAGAAGAGATATTGTCAAAAAATCATGAGTTTGGAGAAAATGATGTAGAAACTACTAGAGAGGTTGCTCTTAAATTTATGGTTGTGATTATTGTTGTGTTGGTTATTGTAAATTATCTTGTGGATATGAGTAAAAGTGTCATGGCTCAAGGTCAATCATATTTTCAAAATTAG 591 0.3367 MESKHAHNRTYEDFDPIYKWRREQGSDTVELHLPGFKREQIRIQINHLGFLVISGERPCDGTKWKRFKKEFELPKYCNEDAIRGNFMQNILSVVMPKKVDLIPQEELVEEQMPELEDVDDYKYQEKKTFQSLKFGGRNIEEEILSKNHEFGENDVETTREVALKFMVVIIVVLVIVNYLVDMSKSVMAQGQSYFQN* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1179 196 CDD ACD_sHsps-like 28 97 - -
Tpr6g1179 196 Gene3D - 1 100 IPR008978 -
Tpr6g1179 196 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 9 113 IPR002068 -
Tpr6g1179 196 Pfam Hsp20/alpha crystallin family 23 100 IPR002068 -
Tpr6g1179 196 SUPERFAMILY HSP20-like chaperones 8 100 IPR008978 -
Tpr6g1179 196 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 1 194 - -
Tpr6g1179 196 PANTHER HEAT SHOCK PROTEIN 26 1 194 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1179 Tpr-Chr6 11922866 11926269 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1179 - - ccaj:109795537 209.92