Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1166 ATGTTTCGTTCTTCTTCCTTCTACCACTACTCTCATAATCATGTTGCAACTTCATTCAAGAGCTTTTTCTTCTTCATTCCAACTACTTTAGCTCTTTTAACATCACTTTTCATTCTCATCTATGTTTATTCTACCTCAATCATCTTCACACACCATCATCATCAACATCACCACAAATTCCAACCTATTCTTCATTTAAAATCATCATCTCCAAATTTTACTCTTCCTTCTCCAACCTCTCACTTAACAACTTCCTCACACAAAAATGATTCTGAGTTCATCAAGTCTCACACTTTCCAATTGGGTGATCATATTCTTGGCCTTGGACCACAAAGTCAACATGGTTTATCACCTGATCAATCCAGCTTAAAGGCAGAACGAAGTACACAGAAGAAGAAGAAGATAGCTCTTTCTTTTGGTTCAGAAAAATTTGAGGAAAAAACTAATGTGTTCCATGATAGAGATATCTTTCTTGAAGATTATAAAGAAATGAATAGGAGCTTTAAGATATATGTTTATCCTCACAAGAAAGATGATCCTTTTGCAAATGTGCTATTACCTGTGAAAACTGAACCTGGTGGCAATTATGCCAGTGAAAGTTACTTCAAAAAAGCACTTATGAAGAGTCATTTCATTACAAATGATCCAACAGAAGCAGATCTTTTCTTTATGCCTTTTTCCATAGCAAGTTTGCGGCATGATCGTCGAGTTGGAGTTGGAGGTATCAAAGATTTCATTAGAGACTATGTACAGAATATCATTCATAAGTATCCGTATTGGAATCGCACGGACGGCGCGGATCACTTTTATGTTGCCTGTCATTCAATTGGAAGGTCTGCTATGGATAAAGCACCTGATGTGAAATTCAATGCCATTCAAGTTGTTTGTTCATCAAGTTATTTCTTAAGTGGCTATATTGCTCATAAGGATGCTTGTTTACCACAAATTTGGCCAAGAAAAGAAAACCTCCCTAAGCTTGTTTCATCTAATAGGAGAAAGCTAGCTTTCTTTGCCGGAGCAGCTAATTCGGCATTAAGGAGAAATCTTGTTGAGACATGGAAAAATGATTCAGAAATATTTGTTCATCATGGAAGACTAAAAACACCATATGCAGATGAGTTATTAGGAAGCAAGTTTTGTCTTCACGTTAAAGGCTTTGAAGTGAACACAGCACGAATCGGAGATTCATTATACTATGGTTGTGTTCCGGTGATCATCGCTGATCATTATGACCTTCCATTTGCAGATGTTTTGAATTGGAAGAGATTTTCTGTTGTTGTCACTACTTTAGACATACCTTTACTGAAAAAGATTCTGAAAAGTATGGTTAATTCTGGTGAGTATTTGATGCTACAGAGGAATGTGTTGAAGGTGAGGAAACATTTTCAATGGCATTCACCTCCACTTGAATTAGATTCATTCTATATGGTTATGTATGAGTTATGGCTTAGAAGAAGTTCTATACCAATTTTGTTGGGGGATTCTTAG 1488 0.3622 MFRSSSFYHYSHNHVATSFKSFFFFIPTTLALLTSLFILIYVYSTSIIFTHHHHQHHHKFQPILHLKSSSPNFTLPSPTSHLTTSSHKNDSEFIKSHTFQLGDHILGLGPQSQHGLSPDQSSLKAERSTQKKKKIALSFGSEKFEEKTNVFHDRDIFLEDYKEMNRSFKIYVYPHKKDDPFANVLLPVKTEPGGNYASESYFKKALMKSHFITNDPTEADLFFMPFSIASLRHDRRVGVGGIKDFIRDYVQNIIHKYPYWNRTDGADHFYVACHSIGRSAMDKAPDVKFNAIQVVCSSSYFLSGYIAHKDACLPQIWPRKENLPKLVSSNRRKLAFFAGAANSALRRNLVETWKNDSEIFVHHGRLKTPYADELLGSKFCLHVKGFEVNTARIGDSLYYGCVPVIIADHYDLPFADVLNWKRFSVVVTTLDIPLLKKILKSMVNSGEYLMLQRNVLKVRKHFQWHSPPLELDSFYMVMYELWLRRSSIPILLGDS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1166 495 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 120 488 - -
Tpr6g1166 495 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 120 488 IPR004263 GO:0006486|GO:0016757
Tpr6g1166 495 Pfam Exostosin family 165 442 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1166 Tpr-Chr6 11774389 11778353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1166 - - gmx:100798319 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1166 6 11774389 11778353 Tpr6g1166 6 11774389 11778353 ECH