Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1165 ATGGCCGCCGCCAACGATCCAAACAACCAAACTCAGATGGCGTTAATTCTCGGCCAAGATTCCACTCACTTCGAATCCCTAATTACAAATCTCATGTCAACCTCCAACGACCACCGTTCCCAAGCCGAAAATCTCTTCAATTTATGCAAACAAACTTACCCCGATTCCCTAATTCTCAAATTATCTCAACTTATCCACACTTCCCCTAACGAACAAACACGAACCATGTCCACTATCCTCCTCCGCCGTCATCTCACGCGCCACCACGACGATTCCTTCATCTATCCACATCTTTCCCTTTCCACTCAAACAACCCTCCGTTCTCTTCTTCTTTCGTCTCTCCATAAAGAGCCGGTGAAATCCATCGCTAAGAAGCTATGTGATACTGTTTCTGAACTTGCGTCCGCTCTTCTTTCCGATGATATGAATTCTTGGCCGGACTTGCTTCCTCTTTTGTTTCAGTGGGTTACTTCATCTGACCCTAGGCTTCAGGAAATTTCGTTAATTATATTCGCTCAATTGGCTCATTATATTGGTGAAACCCTACTTCCTCAATTGTCTACTCTTCACTCTGTTTTCCTTCGTTGTCTTGGCGCTGCTACTTCTTCTGATGTCCGAATCGCTGCCCTTGCTGCAAGTATCAACTTTGTTCAGTGCCTCTCCAATCCCTCTGACCGCGACAGGTTTCAGGATTTGCTGCCACTCATGATGCAGACATTGACTGAGGCATTGAATTCTGGTCAGGAGGCAACTGCGCAGGAGGCCCTTGAGCTCCTCATTGAGCTTGCTGGTACTGAGCCACGTTTCCTAAGAAGGCAGCTCGTTGATGTTGTCGGTGCCATGCTGCAGATTGCTGAGGCTGAGTCTTTAGAAGAAGGGACTCGCCATTTGGCTATTGAGTTTGTTGTTACACTTGCTGAGGCGAGGGAGCGTGCTCCTGGGATGATGAGGAAGTTGCCACAGTTTGTGAAGAAGTTGTTTGGTGTTCTTCTGAACTTGTTGCTGGATATTGAAGATGATCCTGCTTGGCATGCTGCACTGACCGAGGATGAGGATGCTGGTGAGACTACTAACTATGGATTTGGACAGGAATGTTTGGACAGACTTTCAATTTCTTTGGGTGGGAACACGATTGTGCCGGTTGCGTCTGAGTTGTTGCCGACTTACTTGGTTTCCCCTGAATGGCAAAAGCACAATGCTGCGCTCGTTGCCATCGCACAAATTGCAGAGGGTTGTTCAAAGGTGATGACAAAGAATCTGGAGCATGTATTGTCAATGGTTTTGAATTCATTTTCTCACCCACACCCTAGGGTGCGATGGGCGGCTATAAACGCAATTGGGCAGTTGTCCACAGATTTAGGGCCAGACTTGCAAGTTAAATATCACCACTTAGTGCTTCCGGCATTAGCTGGTGCCATGGATGATTTTGAAAATGCTCGAGTACAGGCTCATGCTGCTTCTGCAGTGTTAAATTTCACTGAGAATTGCACCCCAGATATTCTAATACCTTATTTGGATGGGATTGTGAGCAAACTTCTTGTACTCCTTCAGGGTGGAAAGCAAATGGTTCAAGAAGGCGCTTTGACAGCTTTAGCATCAGTTGCTGATTCTTCACAGGAGAAATTTGAGAAGTATTATGATGTTGTGATTCCATACTTAAAAGCTATTTTGATGAATGCAAATGACAAATCCAATCGTATGCTTCGTGCCAAAGCAATGGAGTGTATTAGTTTGGTAGGGATGGCTGTTGGAAAGGCCAAATTCAGGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCTGATGATCCAACCGCGAGTTACATGTTACAAGCATGGGCACGACTTTGCAAGTGTCTCGGACAAGATTTTCTCCCATACATGGGTTTTGTCATGCCTCCCTTGCTCCAGTCTGCACAACTTAAGCCTGACGTGTCAATTACATCAACAGATTCTGATGCTGAGTTTGATGAAGATGATGACAGCATTGAAACCATTACTCTCGGGGATAAAAGAATAGGCATTAAGACCAGTGTCCTGGAGGAGAAGGCTACAGCATGTAACATGTTATGTTGTTATGCTGATGAGTTGAAGGAAGGTTTTTTTCCTTGGATTGACCAGGTTGCTTCCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGCTTCAGCTATGCCAGAACTGTTGTCTTCAGCAAAATTAGCAATAGAGAAGGGGCAGTCACAAGGCCGTGATGCAGCTTACCTAAAACAATTGTCTGATTATATAATTCCAAATTTGGTGGAAGCTTTACATAAGGAGCCAGAGGTAGAAATTTGTGCAAGCATGTTGGACGCGCTGAATGAATGCATACAGGTCTCGGGACCACATCTAGATGAAAAACAAGTAAGGAGCATTGTTGACGAGATTAAACAAGTCATCACGGCCAGTTCAACCAGAAAGAATGAAAGAGCAGAGAGAGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCACGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAATCGGTGATTGTTTGGGGACATTGATAAAAACATTCAGGGCATCTTTTTTGCCTTTCTTTGATGAGCTTTCGTCATTCCTAACACCTATGTTTGGTAAAGACAAAACCTCAGAAGAAAGGAGAATTGCCATTTGTATATTCGATGATGTTGCCGAGCACTGTCGCGAATCAGCTCTTAAATATTATGTTTCATTTCTCCCATTCTTGCTTGAAGCCTGCAATGATGAATGTTCAGATGTTCGACAGGCAGCTGTTTATGGTGTTGGTGTTTGTGCCGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAAATGCTGTGATAACACATCCAAATGCACGGAATTCTGATAATGTAATGGCATATGATAATGCTGTTTCAGCCCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCAGCCTGGTTAAGTTGTTTGCCTATAAAAGGTGATTTAATTGAGGCTAAAGTTGTGCATGACCTACTTTGTTCAATGGTTGAAAGGTCTGATAGAGAACTTATAGGTCAAAACAATCAGTATCTTCCCAAGATTATTGTAATTTTTGCCGAGATATTATGTGCGGGAAATGATCTGGCAACTGAACAAACCATAAGTCGGATGATTAACTTATTGAGGCAACTTCAACAGACTTTGCCGCCTTCTACCCTTGCTTCAACCTGGTCATCTTTGCACCCTCAGCAACAGCTTGCACTTCAGTCCATCCTATCATCCTAA 3360 0.4381 MAAANDPNNQTQMALILGQDSTHFESLITNLMSTSNDHRSQAENLFNLCKQTYPDSLILKLSQLIHTSPNEQTRTMSTILLRRHLTRHHDDSFIYPHLSLSTQTTLRSLLLSSLHKEPVKSIAKKLCDTVSELASALLSDDMNSWPDLLPLLFQWVTSSDPRLQEISLIIFAQLAHYIGETLLPQLSTLHSVFLRCLGAATSSDVRIAALAASINFVQCLSNPSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQLVDVVGAMLQIAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVKKLFGVLLNLLLDIEDDPAWHAALTEDEDAGETTNYGFGQECLDRLSISLGGNTIVPVASELLPTYLVSPEWQKHNAALVAIAQIAEGCSKVMTKNLEHVLSMVLNSFSHPHPRVRWAAINAIGQLSTDLGPDLQVKYHHLVLPALAGAMDDFENARVQAHAASAVLNFTENCTPDILIPYLDGIVSKLLVLLQGGKQMVQEGALTALASVADSSQEKFEKYYDVVIPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKAKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVSITSTDSDAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVASTLVPLLKFYFHEEVRKAAASAMPELLSSAKLAIEKGQSQGRDAAYLKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVITASSTRKNERAERAKEEDFDAEERELLTEENEQEEELFDQIGDCLGTLIKTFRASFLPFFDELSSFLTPMFGKDKTSEERRIAICIFDDVAEHCRESALKYYVSFLPFLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNARNSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDLLCSMVERSDRELIGQNNQYLPKIIVIFAEILCAGNDLATEQTISRMINLLRQLQQTLPPSTLASTWSSLHPQQQLALQSILSS* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1165 1119 Gene3D - 16 1118 IPR011989 -
Tpr6g1165 1119 Pfam Importin repeat 6 788 890 IPR041389 -
Tpr6g1165 1119 Pfam Importin repeat 289 380 IPR041653 -
Tpr6g1165 1119 Pfam HEAT repeat 927 955 IPR000357 GO:0005515
Tpr6g1165 1119 Pfam HEAT repeat 424 450 IPR000357 GO:0005515
Tpr6g1165 1119 Coils Coil 834 854 - -
Tpr6g1165 1119 SUPERFAMILY ARM repeat 691 1095 IPR016024 -
Tpr6g1165 1119 PANTHER IMPORTIN BETA 13 1118 IPR040122 GO:0006606
Tpr6g1165 1119 PANTHER BNAC09G37860D PROTEIN 13 1118 - -
Tpr6g1165 1119 SUPERFAMILY ARM repeat 22 830 IPR016024 -
Tpr6g1165 1119 SMART TOG_3 372 620 IPR034085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1165 Tpr-Chr6 11762911 11771463 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1165 K20222 - gmx:100797431 1861.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1165 6 11762911 11771463 Tpr6g1165 6 11762911 11771463 ECH