Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1158 ATGAAGACTATGGTGACGCCATTGACAAGGGTCTCTACATATTTTCGCCCAATTTCCCATAATGCCCTTCCTTTCTCCCCCAAACCACGCAACACTTCATTACCTAACTCCTTCACCTTCACCTCTCCCACTCCCACTCTTTCAATGGCTGCTTCTTCCCAATCCACTGCTCCGGTTGCGTCATCGTCATCTGGTGATGTTAACATAAGAAAAGATGATATCTTTCAATTAATTCAGGCTCATCAGGAAAAAGCTGCAAGACTTCCAGCAATTGAAGAGATTCGAACTGTCCTTGATCGGAGTCTACGTGGTACGCTCTCCACATTCTCGAAGAAGTATGGCGGTTATCCATCAGGATCTATGGTTGACTTTGCATGTGATGCAGATGGATGTCCTATATTAGCATTGAGCGACTTGGCAGTTCATTCGAAGGACTTAGCTGCTAATCCTAAATGTTCAGTGCTTCTCGCTAGAGATCCTGAAGATAGGACTGATTTGGTGATCACTTTACATGGTGACGCTGTCTTTGTACCTGAAAAGGATAATGCGGCCATACGAGCTGCATATTTGGCAAGACATCCCAATGCATTTTGGGTTGATTTTGGAGACTTCCGATTTGTACGAATTGAACCAAAAGTTGTACGATTTGTGTCAGGTGTTGCCACTGCTTTGTTAGGATCAGGAGAGTTTAATGGAGATGAGTACAAATCTGCAAAAGTTGATCCCATAGCTCAGTTTTCTAAGCCAGTAGCGTCACATATGAACAAAGATCATGGTGAAGATACTAAAGCGATTGTGCAGCACTGGACCTCAGTTCCGGTGGACTTTGCTGACATATTAGATTTGGATCGTCTAGGTTTCAATGTTAAGGCTGGTTATCAGGGAGATATTTTCAAGCTCCGTGTACCTTTCCCTCGACCTGCAGAAGATAGAAAGGACGTTAAGACTCTCATTGTTGAGATGCTCCAAGCTGCTAAGCCACAAGTGTGA 990 0.4394 MKTMVTPLTRVSTYFRPISHNALPFSPKPRNTSLPNSFTFTSPTPTLSMAASSQSTAPVASSSSGDVNIRKDDIFQLIQAHQEKAARLPAIEEIRTVLDRSLRGTLSTFSKKYGGYPSGSMVDFACDADGCPILALSDLAVHSKDLAANPKCSVLLARDPEDRTDLVITLHGDAVFVPEKDNAAIRAAYLARHPNAFWVDFGDFRFVRIEPKVVRFVSGVATALLGSGEFNGDEYKSAKVDPIAQFSKPVASHMNKDHGEDTKAIVQHWTSVPVDFADILDLDRLGFNVKAGYQGDIFKLRVPFPRPAEDRKDVKTLIVEMLQAAKPQV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1158 329 SUPERFAMILY FMN-binding split barrel 91 325 - -
Tpr6g1158 329 Pfam Domain of unknown function (DUF2470) 248 321 IPR019595 -
Tpr6g1158 329 Pfam Pyridoxamine 5'-phosphate oxidase 95 218 - -
Tpr6g1158 329 Gene3D - 240 329 IPR037119 -
Tpr6g1158 329 Gene3D - 72 225 IPR012349 -
Tpr6g1158 329 PANTHER OS07G0573800 PROTEIN 39 328 - -
Tpr6g1158 329 PANTHER CREG1 PROTEIN 39 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1158 Tpr-Chr6 11688667 11694139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1158 - - gmx:100792427 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1158 6 11688667 11694139 Tpr6g1158 6 11688667 11694139 ECH