Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1146 ATGGCAGCTGTTGCTCCTTCTCCTGACAAAGCTGCAAGTTTACTGCAGAGTTTGACCCTGGATTCACAACCCAAGACTATTGTTGGAGATGTTGAGCCTGTCAAGAAGAATGGAGCTGCTTTTTCCAATGGTACAGCTAAGGGGGCGGGCAAGCCATTCAATCCAAATCCAAGTTTTGTTCCTAACAATGGATATCCTTCGACTACATATTATTATGGAGGTTATGACGGGCAAGGAGATTGGAGTGCCTATCCCAATTATTTGAACCTTGATGGAGGGATGGCTCAAAGTGTTTATGGGGATAATTGCTCTTATATGTATCATCAAGGTTATGGCTACCCACCATATGGAGCATATGCTTCGCCGAATTCCTCCTCACCAATAGTTCAACCTGATGGTCAGATGTATGGGCTTCAACAGTACCAGTATCCTTGTTCTTATTACAACTCTCCAACTTCTGCTGATGGATCATTTTCTTCTTACAAAACCAGTGTTCCACAACGAGAAATGTCAACTGCTGTTAATGCGGATCGCATTCCTCCAAATGTTATGAATAAAGGAAACTCTGTTAGCCTGGTCAATGGTGACTGTACAAACCAAAATGGGTTAAAGGCTTTTATATCAAGTTCCCAGCACACATCTTTGAATACAAGGGATTCTTATCAAGGGTCTAGCTTGCCAGCTTGTGCTCCATTGTCAGGACATCAGGGTCCAAAGTTGAGTACTCACGGTACACAGTCAGCAATTGCTACAGACGTGTCATTGGTTTCTGATAGACAGTTCAAACATGGAGGAAAGGTTGGATTATCTTCACAAGCGGCTCATGTCAAAGATTTCTCATCTCAAAGGAATCAACGACACTCTCAGCCACTTCCACAATTCATGAACTTGAATGGTTCCAGGCATCCATCTGGAATGGAACTAGTTCCTGGATTCATGAACGGGATTTATCCAAGCAACAGTATGTTCAGCCAATATGGAAACACATTCAGAGCAAATTCTCGTTATGGGTCTTCTGTATATGGATCTAGAACAGGTTCTTTTGATAGCAAGTATAGATCCACAGGTAATGGCTATTTTGCTAATGATTCCAGAAAAAATGTGGACGGTTTCAGTGAGCTAAACAAGGGACCAAGAGGTGCCAAGAGTTACGATAATAAAAGCGCCAAAAGTCTTGGAGCTGTCACATTATTACTCAAAGGACAGAACCTTACAGTGAAGAGTGATGACAAAGAAGTAGTGCCTCTTGTTGTTCCAAGTAAAGAACATTACAATGGAGAAGATTTGTCTGAGCATTATTCTGATGCTAAGTTTTTTATCATCAAATCCTATAGCGAGGACGATGTTCATAAGAGCATAAAATACAATGTTTGGGCAAGTACTCCCAACGGCAACAAAAAGCTGGATGTGGCATACCAGGAAGCCAAGGAGAAGCCTGGTGGCTGTCCTATATTTTTGTTATTTTCGGTCAACACTAGCGGTCAATTTGTTGGTTTAGCCGAGATGACTGGTCCGGTTGATTTTGATAAATCTGTAGAGTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTAATGTGAAGTGGCATGTCATTAAGGATATTCCAAATGGCGTGTTAAGGCACATAACACTAGAAAACAACGAAAACAAACCTGTAACTAATAGCAGGGATACTCAGGAGGTTAAGTTCGATAAGGGTATTCAAATTGTCAAAATTTTCAAGGAGCATTCAAGCAAAACAAGCATATTGGATGATTTTGGCTTTTACGAGTCCCGTGAAAAGACCACTCAAGAGAGAAAATATAAAGAGCAGCAGTTACCAAAACAGGTGAACAAGACCAGTGATATAACATTTGGCTCAGTTACATCACCCAAGTCTCTTGGTACAGCACAAGCAAAGTTGAATGAATCAGCTATTGCAGAAGCAGCACGAGGAAAGTTGAATTCAGAGGTGCTGTTAGAAAGGAATGGATCCACACCAGCATTTGAAGATTCTTCTAAGAGCAGTTAG 2010 0.4149 MAAVAPSPDKAASLLQSLTLDSQPKTIVGDVEPVKKNGAAFSNGTAKGAGKPFNPNPSFVPNNGYPSTTYYYGGYDGQGDWSAYPNYLNLDGGMAQSVYGDNCSYMYHQGYGYPPYGAYASPNSSSPIVQPDGQMYGLQQYQYPCSYYNSPTSADGSFSSYKTSVPQREMSTAVNADRIPPNVMNKGNSVSLVNGDCTNQNGLKAFISSSQHTSLNTRDSYQGSSLPACAPLSGHQGPKLSTHGTQSAIATDVSLVSDRQFKHGGKVGLSSQAAHVKDFSSQRNQRHSQPLPQFMNLNGSRHPSGMELVPGFMNGIYPSNSMFSQYGNTFRANSRYGSSVYGSRTGSFDSKYRSTGNGYFANDSRKNVDGFSELNKGPRGAKSYDNKSAKSLGAVTLLLKGQNLTVKSDDKEVVPLVVPSKEHYNGEDLSEHYSDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDVAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMTGPVDFDKSVEYWQQDRWTGCFNVKWHVIKDIPNGVLRHITLENNENKPVTNSRDTQEVKFDKGIQIVKIFKEHSSKTSILDDFGFYESREKTTQERKYKEQQLPKQVNKTSDITFGSVTSPKSLGTAQAKLNESAIAEAARGKLNSEVLLERNGSTPAFEDSSKSS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1146 669 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 669 IPR045168 -
Tpr6g1146 669 Pfam YT521-B-like domain 436 574 IPR007275 GO:0003723
Tpr6g1146 669 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 669 - -
Tpr6g1146 669 MobiDBLite consensus disorder prediction 652 669 - -
Tpr6g1146 669 ProSiteProfiles YTH domain profile. 436 573 IPR007275 GO:0003723
Tpr6g1146 669 Gene3D ph1033 like domains 418 587 - -
Tpr6g1146 669 MobiDBLite consensus disorder prediction 645 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1146 Tpr-Chr6 11556761 11562719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1146 - K20102 gmx:100818027 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1146 6 11556761 11562719 Tpr6g1146 6 11556761 11562719 ECH