Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1145 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAATTAAACTTAATAAAAGCCTCTTCAGCTGCTACTACAACTACAACAACAACAACTCCTGAGTCACTCAATGAGAAATATGGAAGAAAAGGTATCAAATTCTTGGAGTCTAATAGCATTCCCATTGTTGAGTTGACTGTTAGAAATGGAAGCTCATTGAGTTTAAGAATACCTGATGCTCATGTTACATCTTACAAACCAAAAGTGTTTTGGAAAGATGATGGATGTGAGGAATTTCTTTACACAATTCCTGCTGATGAAACTGGTCTTTATAAAGCCAAAGGTGGAATTGGTTTGGTTTTCAATGAAGTGTTACAACCTGGTGCAAAAGAGTTGTTTCCTTCTACTTTAGAATGGACTGTTAATGATGTTGATTATGATGCCATTGATGCTCTTCAGGTTGAATTGATCAGCACTAATAGATTTTTTGACATCACATACATTGTGTCCCTATATCCTGTGAGCATGGCAACAGCAGTTATAGTTAAGAACAAAGCTCCAAAACCAGTCACTCTAACCAATGCTATACTAAGCCATTTTAGATTTAAGAGAAGAGGTGGAGCTGCAATTAAAGGTCTTCAAACTTGCTCATACTCCACACTCACTCCTCCTGTTTCTCCTTTTCAAATCTTGACTCCATCAGAAGCAATTAAATCTCAGTCTCAGAGATTGATTTCATTTGGTGCCGAGCCTGAAGTGAAGCAAGGTTCATGGACTAAACAAGAAGTTCCTATTACTCTCCTTGAAAATAAGATGAGTAGAGTTTTTGCTGCACCTCCGGAAGAAAGATCAAAGGCTTTTTATAACACACTACCTTCAAAATACGAAATCATCGATCAGGGACGCGAGATTTTCTACAGGGTGATAAGAATGGGATTTGAGGATATTTATGTGTCAAGTCCTGGTTCATTGTCGGAGAAATACGGAAACGATTATTTTGTATGCACCGGTCCTGCTTCATTATTGGTGCCTGTGACTGTGAATCCTGGTGAAGAATGGAGAGGAGCACAAGTTATTGAGCATGATAATCTCTCATAA 1068 0.3811 MASFLSLSLPKLNLIKASSAATTTTTTTTPESLNEKYGRKGIKFLESNSIPIVELTVRNGSSLSLRIPDAHVTSYKPKVFWKDDGCEEFLYTIPADETGLYKAKGGIGLVFNEVLQPGAKELFPSTLEWTVNDVDYDAIDALQVELISTNRFFDITYIVSLYPVSMATAVIVKNKAPKPVTLTNAILSHFRFKRRGGAAIKGLQTCSYSTLTPPVSPFQILTPSEAIKSQSQRLISFGAEPEVKQGSWTKQEVPITLLENKMSRVFAAPPEERSKAFYNTLPSKYEIIDQGREIFYRVIRMGFEDIYVSSPGSLSEKYGNDYFVCTGPASLLVPVTVNPGEEWRGAQVIEHDNLS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1145 355 SUPERFAMILY Galactose mutarotase-like 44 349 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tpr6g1145 355 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 14 354 - -
Tpr6g1145 355 Gene3D - 49 355 IPR014718 GO:0030246
Tpr6g1145 355 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 14 354 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1145 - - gmx:100788455 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1145 6 11553704 11556130 Tpr6g1145 6 11553704 11556130 ECH
Tpr6g1145 6 11553704 11556130 Tpr5g0480 5 7206829 7209310 PCT