Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1137 ATGGGTGCGAGTCGAAAGCTTCAAGGAGAAATAGATCGTGTTCTTAAGAAGGTTCAAGAAGGCGTTGAAGTATTCGATAGTATCTGGAACAAGGTTTATGATACGGACAATGCAAATCAGAAGGAGAAATTTGAGGCAGACCTTAAAAAGGAGATTAAGAAGCTTCAGAGGTATAGAGATCAAATTAAGACATGGATTCAATCCAGTGAAATCAAGGATAAGAAGGTTAGTGCCTCGTATGAGCAAGCGCTGGTGGATGCTCGGAAGTTAATTGAACGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACGAAGACCAAAGCATTCTCGAAAGAAGGCTTGGGTCAGCAGCCTAAGACTGATCCGAGAGAGAAGGCTAAATCGGAGACAAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAGCTTTGAAGCCGAGCTTGAAGGCCTTACAGTCAAGAAAGGAAAAAACAGGCCTCCTAGATTGACGCATCTGGAGACATCAATTACTCGGCACAAGGCTCATATAAATAAATGTGAATTAGTTTTGAGGCTTCTAGATAATGACGAATTGAGTCCAGAGCAGGTTAATGATGTGAAAGATTTCTTGGATGACTATGTAGAGCGTAATCAGGATGATTTTGATGAGTTTGATGATATTGATGACCTATACAGTTCATTACCTTTAGACAAGGTTGATACTCTAGAAGATCTTGTTACAAATCCCACAAGTGTTGCTGTGACAAAGACAATAAGTTCATTACCTTTAGACGAGGGGAAGATTCTAGAAGATCTTGTTACAATTCCCACTGGTCTTGCAAAGGGGGTACCTGGTCTTAGCTTGAAGAATCCTCTGGTAGCATCTGTATCACTGTCAGCGTCATCACAAACATCTGAGCAAGCTGATGAGACGGCGTCTCAGGATAGCAATTCGGACATTGTGGCAAAAACTCCACCTCCTAAAAGTGGTGGAATTAGCCCTTCTGCTTCAACACCTACTGGCAACCATGCTACTCCTGCCTCTGTGAATGTTTCTGCTCTTAACTTGTCCAGTGCACCAGCTGCTGCAGTCCTTCCTGGTTCAAATTCTGTTCGAAATGTCTTGGAGAATGCTGTTGTAAACCAGTCTGCCTCTCCAAAGGAAGAAGAAATTAATAGCTTCCCTAACCGTAGACCATCTCCGTCGCTTTCTGATGTAGCACTTGCGAGGAGCAGAAACAGCTTGTCAAATCAAGCAACAGCCAGCATCCCTCTTGGTTCTGGAAACATGGTTTCTAGTAATGGGTCCCCTGGTTCAGTCCCTTCAGCCTCAGAAATAACTAAGCGAAACATATTGGGAGCTGATGATAGACTTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCGCTAAGTAATAGATTGATCTTGCCTCAGGTTGGGAAAGCTAATGATGGACCCACCTCAGTTGACTCTGGTACTGTCAGTGAAGCTGCAGCTGTATCTGGGAGAGTTTTCTCCCCTTCTGTGGTTCCCGGCATGCAATGGAGACCTGGAAGTCCCTTTCAAAATCAGAATGATGCAGGGCAGGTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGCTTCAGCAAGTGCAACAACAAGGGCCCAGTACCCTTCTTAATATGCCTTCCCTTGTCGGAGGAAACCACAAGCAGTTTTCTTCCCAACAACAAAATCCACTTTTGCAGCAGTTCAACTCTCAAGGCCCATCTGTTTCTTCACAATCTGGTATGGGACTTGGTGCCCAATCCCCAGGCTTCAGCGGTATTTCGTCTGTCTCAGTACAGCAGCCCAACTCTGTTCTTTCCCCGTCTAGTCAACAGCCAATTCCCGGTTTTGCTAAAGATGCAGATAAAATTGAAGAACAGCAGCAACATCAGAATTTTCCTGATGAGTCAGCAATTGAATCTACTTCTAGCACAGGGATTGGCAAGAATCTCATAGTTGAAGATGATTTGAAATCGCCATATGTTGTAGATTCACCTGCAGGTGTATCTGCCTCTCTTCCAGAAGCTGCTCAAATTTCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAATCCAATCAATCCACTGGCAGCCTTGGTGTAATTGGAAGAAGAAATGGTGTTGAACTTGGAGCCATTGGTGATAGCTTTAGTGCATCAAGTGTTAGTTCTGGTGGAGTTCGTGATCAACAGTATAATTTACAAATGCTTGAGGCAGCACACTTCAAAATTCCACAAGCTAAAGACTCAGAACGTCCTAGAACCTATACTCCTAGGCACCCAACAATTACACCTCCTTGCTATCCTCAAGCACAAGCGCCTATAGTTAACAATCCTGCCTTTTGGGAGAGATTAGGTCTTGAACCATTTGGCACTGATACCCTGTTCTTTGCATTTTATTATCAACAGAACACATACCAACAATATTTGGCTGCAAAGGAGCTGAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACTGATGAATATGAGCAGGGAACATATGTGTACTTTGATTTTCATATTGCAAATGATGATCATAATAAACATGGATGGTGTCAAAGAATCAAGAATGAATTCACTTTTGAATATAATTTTCTTGAAGATGAGCTTCTTGTATAG 2712 0.4292 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDSFEAELEGLTVKKGKNRPPRLTHLETSITRHKAHINKCELVLRLLDNDELSPEQVNDVKDFLDDYVERNQDDFDEFDDIDDLYSSLPLDKVDTLEDLVTNPTSVAVTKTISSLPLDEGKILEDLVTIPTGLAKGVPGLSLKNPLVASVSLSASSQTSEQADETASQDSNSDIVAKTPPPKSGGISPSASTPTGNHATPASVNVSALNLSSAPAAAVLPGSNSVRNVLENAVVNQSASPKEEEINSFPNRRPSPSLSDVALARSRNSLSNQATASIPLGSGNMVSSNGSPGSVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQVGKANDGPTSVDSGTVSEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQVRGRTEIAPDQREKFLQKLQQVQQQGPSTLLNMPSLVGGNHKQFSSQQQNPLLQQFNSQGPSVSSQSGMGLGAQSPGFSGISSVSVQQPNSVLSPSSQQPIPGFAKDADKIEEQQQHQNFPDESAIESTSSTGIGKNLIVEDDLKSPYVVDSPAGVSASLPEAAQISRDIDLSPGQPLQSNQSTGSLGVIGRRNGVELGAIGDSFSASSVSSGGVRDQQYNLQMLEAAHFKIPQAKDSERPRTYTPRHPTITPPCYPQAQAPIVNNPAFWERLGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDHNKHGWCQRIKNEFTFEYNFLEDELLV* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1137 903 Pfam NOT2 / NOT3 / NOT5 family 758 897 IPR007282 GO:0006355
Tpr6g1137 903 Gene3D - 742 898 IPR038635 -
Tpr6g1137 903 Coils Coil 41 61 - -
Tpr6g1137 903 PIRSF NOT_su_3_5 1 903 IPR012270 GO:0006355|GO:0030015
Tpr6g1137 903 PANTHER CCR4 NOT-RELATED 1 246 IPR040168 GO:0030015
Tpr6g1137 903 PANTHER CCR4 NOT-RELATED 253 903 IPR040168 GO:0030015
Tpr6g1137 903 MobiDBLite consensus disorder prediction 110 131 - -
Tpr6g1137 903 MobiDBLite consensus disorder prediction 300 322 - -
Tpr6g1137 903 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Tpr6g1137 903 PANTHER BNAA10G16600D PROTEIN 253 903 - -
Tpr6g1137 903 PANTHER BNAA10G16600D PROTEIN 1 246 - -
Tpr6g1137 903 MobiDBLite consensus disorder prediction 300 342 - -
Tpr6g1137 903 MobiDBLite consensus disorder prediction 380 405 - -
Tpr6g1137 903 Coils Coil 139 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1137 K12580 - gmx:100783415 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1137 6 11412509 11422731 Tpr6g1137 6 11412509 11422731 ECH