Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1120 ATGCCAAGGAATGTGGTCAATCCTCTTGTTGTAGGGGGTGTCATAGGAGATGTTTTGGACCCTTTTACAAACACTGTTTCTTTGAGTGCTATCATCAATAACAAAGAGATTAGCAATGGTTGTCAATTGAGGCCCTCTCAATTGGTAAACCCTCCAAGGATTAATGTTGGTGGTGATGATCTCAGGACTTTCTACACATTGGTTATGGTGGACGCAGATGCACCTAGCCCTAGTAACCCTTCTTTGAAGGAATACTTGCATTGGATGGTGACGGATATTCCAGCAACAACAAATGCAAGCTTTGGGAAAGAGATGGTATTTTATGAGAGCCCAAAACCTTCTGCAGGGATTCATCGACTTGTGATTGTATTATTAAAGCAATTGGGCAGAGACACTGTTTTCGCCCCAGATTGGCGTCATAATTTCAACACTAGAAACTTTGCTGAAATTAACAATCTTGTAATTGTTTCATCACTTTATTTCCACTGCCATAGGGAGCGTGGTTGCGGTGGAAGGAGATGTTAG 525 0.419 MPRNVVNPLVVGGVIGDVLDPFTNTVSLSAIINNKEISNGCQLRPSQLVNPPRINVGGDDLRTFYTLVMVDADAPSPSNPSLKEYLHWMVTDIPATTNASFGKEMVFYESPKPSAGIHRLVIVLLKQLGRDTVFAPDWRHNFNTRNFAEINNLVIVSSLYFHCHRERGCGGRRC* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1120 174 Gene3D - 3 169 IPR036610 -
Tpr6g1120 174 SUPERFAMILY PEBP-like 13 166 IPR036610 -
Tpr6g1120 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 1 173 IPR035810 -
Tpr6g1120 174 CDD PEBP_euk 33 153 IPR035810 -
Tpr6g1120 174 Pfam Phosphatidylethanolamine-binding protein 60 132 IPR008914 -
Tpr6g1120 174 PANTHER FTC 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1120 Tpr-Chr6 11211993 11214117 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1120 K16223 - gmx:100796994 248.825