Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1119 ATGGCCAGTACTAGCAGGAATCCTCTTGTTGTTGGGCGTGTAATAGGGGATATATTAGACCCCTTTGAAAGTTCTGTTCCTCTCGTAGTCACCTATGGTAATAGAACTGTTACTAATGGTCGTGAGCTTAAACCTTCCCAAGTTGCCAATCAACCCCAAGTGAGTATTGGTGGGAATGATCCGAGTACCTTCTACACCCTGATCTTCGTAGATCCAGATGCACCTAGCCCAAGTCACCCCAGGTTTAGAGAGTATCTACATTGGTTGGTGACTGATATTCCAGCAACTACAGAGGCTAGTTTTGGTAATGAGATTGTAGGTTATGAAAAGCCACGACCCACCTTAGGGATTCATCGTTTTGTGTTTATATTATTTCGTCAACAATGTAGACAAAGAGTATCTGCTCCAGGTTGGAGGCAAAATTTCAATACAAGAGAGTTTATTGAAATTTACAATCTTGAACAATTGCCAGTTGCTGCTGTGTTCTTCAATTGTCAAAGGGAGACTGGCTCCGGAGGAAGAACCTTTAGATAA 534 0.4232 MASTSRNPLVVGRVIGDILDPFESSVPLVVTYGNRTVTNGRELKPSQVANQPQVSIGGNDPSTFYTLIFVDPDAPSPSHPRFREYLHWLVTDIPATTEASFGNEIVGYEKPRPTLGIHRFVFILFRQQCRQRVSAPGWRQNFNTREFIEIYNLEQLPVAAVFFNCQRETGSGGRTFR* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1119 177 Gene3D - 1 171 IPR036610 -
Tpr6g1119 177 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 6 175 IPR035810 -
Tpr6g1119 177 CDD PEBP_euk 26 165 IPR035810 -
Tpr6g1119 177 Pfam Phosphatidylethanolamine-binding protein 50 161 IPR008914 -
Tpr6g1119 177 SUPERFAMILY PEBP-like 13 168 IPR036610 -
Tpr6g1119 177 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Tpr6g1119 177 PANTHER PROTEIN FLOWERING LOCUS T-RELATED 6 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1119 Tpr-Chr6 11200342 11205425 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1119 K16223 - gmx:100803909 290.041