Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1102 ATGGTGATGATAATGTTATCACAAGGTGTATTGGATCCAATTCTCTGTTCAACTCCATCATCACTGAACAACAACAAGAAACCATTGTCTTCTTCTTCTTCCTCTGTTTCTTCTCTGTTCTGTAGCGATAACATCAATTATAGAACTGGAAGAAGAAGCTTTTTGATGGCTTCAATTCATAGAACAAACAATTTTCTACGCCATTTGGAATCAATGAAGATTCTTCCATCTGGTGCTGGTTGCATTCCTCATTTGAATGCTGTTATTCTCGGTGAATCTCTCGCTACTGAAGAAAATGATTATGTTCTTCCTAGCGAACAATTCGCTTCCCAAGCAAATGTTCAGTCTCCAGAACAGTATTTGAAGATGTATAAGAGATCAATTGAGGATCCTGCTGGATTTTGGTCTGAAATTGCATCAGAGTTCTATTGGAAACAAAAATGGGGTGATCAAGTTTGTAAAGAAAATTTTGATGTTAGGAAAGGAAATATTAACATTGAGTGGTTCAAAGGTGGGATCACCAACATATGTTATAATTGTTTGGATAGAAATGTTGAAGCTGGACTTGGTGATAAAGTAGCTTTTTATTGGGAAGGGAATGAACTCGGCGTTGATGCTACCTTAACATACACTCAGCTTCTCCATCAAGTTTGTCAGGTTGCAAATTACCTAAAAGATATTGGTGTGAAAAAGGGAGATGCTGTGATTATTTATTTGCCGATGCTTATGGAGCTTCCTATCACAATGCTTGCATGTGCCCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTTCAGAATCTCTTTCACAGAGAATCGTTGATTGTAAGCCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGGTTATCTATCTGAAAGACATAGTTGATACTGCCATCAAGGATTCAACTCAAAATGGGGTCTCTATAGATGTATGCCTAGCTTATGATAATGCATCTGCGTTGAAGAGGGAAGATACTAAATGGACGGAAGGGCGAGATATATGGTGGCAGGATGTCGTTCCTCGATATCCAACTACTTGTCCAGTGGAGTGGCTTGATGCAGAAGATCCACTTTTTCTACTCTATACAAGTGGGAGTACCGGAAAACCTAAGGGTGTTGTCCATACAACTGGAGGTTACATGGTATACACTGCAACAACATTTAAGTACGCATTTGACTACAAGCCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACGGGGCACAGCTATGTCACGTATGGACCCATACTCAATGGTGCAACTGTTGTCCTGTATGAAGGGGCTCCCAATTATCCTGATGCTGGGCGTAGTTGGAACATTGTTGACAAATATAAAGTATCAATATTCTACACTGCCCCTACGTTGGTGCGGTCCCTCATGCGTGATGGTGACGAGCATGTAACCCGCTACTCGAGGAAATCTTTACGAGTCTTGGGAAGTGTAGGGGAACCTATAAATCCAAGTGCATGGAGATGGTTTTACAATGTAATTGGAGATTCAAGATGCCCTATCTCTGATACTTGGTGGCAAACGGAAACTGGTGGTTTCATGATAACTCCACTACCTGGTGCTTGGCCCCAGAAACCTGGTTCTGCCACTTGCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAATGGTGTTGAGATCGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAGAGTTCATGGCCAGGAGCATTCAGAACTTTGTATGGTGATCATGAACGATACGAAACAACATATTTCAAGCCCTTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACTATTGGCTTACCGGAAGAGTTGACGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTCTAGTTTCACATCCAAAATGTGCCGAAGCTGCCGTTGTAGGTGTTGAGCACGAGGTTAAAGGACAGAGTATATATGCTTTTGTTACTCTTGTGGACGGTGTTCCATACAGTGAGGAACTGCGGAAGGATCTCGTACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTTCCAAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTTAGAAAAATTGCTTCTAGGCAGTTAGATGAACTCGGAGATACAAGTACCCTTGCAGAGCCAAATGTGGTTAACCAACTTATTGAACTTGCTGATTCATGA 2262 0.4209 MVMIMLSQGVLDPILCSTPSSLNNNKKPLSSSSSSVSSLFCSDNINYRTGRRSFLMASIHRTNNFLRHLESMKILPSGAGCIPHLNAVILGESLATEENDYVLPSEQFASQANVQSPEQYLKMYKRSIEDPAGFWSEIASEFYWKQKWGDQVCKENFDVRKGNINIEWFKGGITNICYNCLDRNVEAGLGDKVAFYWEGNELGVDATLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSSESLSQRIVDCKPKVVITCNAVKRGSKVIYLKDIVDTAIKDSTQNGVSIDVCLAYDNASALKREDTKWTEGRDIWWQDVVPRYPTTCPVEWLDAEDPLFLLYTSGSTGKPKGVVHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPILNGATVVLYEGAPNYPDAGRSWNIVDKYKVSIFYTAPTLVRSLMRDGDEHVTRYSRKSLRVLGSVGEPINPSAWRWFYNVIGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATCPFFGVQPVIVDENGVEIEGECSGYLCVKSSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHEVKGQSIYAFVTLVDGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLAEPNVVNQLIELADS* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1102 753 CDD ACS 118 740 - -
Tpr6g1102 753 Gene3D - 624 753 IPR045851 -
Tpr6g1102 753 SUPERFAMILY Acetyl-CoA synthetase-like 105 748 - -
Tpr6g1102 753 Hamap Acetyl-coenzyme A synthetase [acs]. 97 751 IPR011904 GO:0003987|GO:0016208|GO:0019427
Tpr6g1102 753 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 115 749 IPR011904 GO:0003987|GO:0016208|GO:0019427
Tpr6g1102 753 Pfam AMP-binding enzyme 189 628 IPR000873 -
Tpr6g1102 753 ProSitePatterns Putative AMP-binding domain signature. 367 378 IPR020845 -
Tpr6g1102 753 PANTHER ACETYL-COENZYME A SYNTHETASE 73 753 - -
Tpr6g1102 753 Gene3D - 98 623 IPR042099 -
Tpr6g1102 753 Pfam Acetyl-coenzyme A synthetase N-terminus 120 180 IPR032387 -
Tpr6g1102 753 Pfam AMP-binding enzyme C-terminal domain 637 715 IPR025110 -
Tpr6g1102 753 PANTHER ACETYL-COENZYME A SYNTHETASE 73 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1102 Tpr-Chr6 10572447 10580647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1102 62 752 Acyl Lipid Metabolism Gene Families AT5G36880 83.068 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1102 K01895 - gmx:100789257 1338.94