Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1092 ATGGAGGTACATTCACCGATTGTAGCCAAAAGACTATGGAATGTGTTGAGGATCTCATTTTTTATGATGAGGAAGAGTGTTTTTTCAAAGAGAAAGATGATTATGAGCATGAATTTGCTGATGAAGAAAGGGAAAGTGTTAAGAAAATCTTTGAGTAAATTCATGTCATCACGCAATTGTCACAACCATCATTCATCAAAGAATTATGGTGGTAGATTTATGGTACATGATTATGAATTCTCTTGTAGTAATAGTCCAAATCCCCTTTTTATTAACAAGTTAAAACGTAACCACCATTTCACTTTCCCTTGTATTAATGCTCCTGAGGTTATTGACGAGGAAATTTTACCTTGTCAATATCTATTGTCACCGCTTAAATTTGAAATTGAAAATGTGTCTAAGGGTAGTATGACTATGGTGCCTAAGACTCCCGAATACACACTCGATTTTAGGTTTGATGCATCTGAAGAGGGAGAGAGCCCACTTCTCTCACCTTTTTCTGTGAGGATCTCTAATTACTCTACATTAGAGGAAAATGAGGAGATTGAAAATAGTCAAGTTGATGATGAGGCTGAAGATTTCATTAGAAGGTTTTATGAACAACTAAGGATGCAGAATGGTTTGCAAAATTGCCCGAATTTTAAAAAATAG 651 0.3518 MEVHSPIVAKRLWNVLRISFFMMRKSVFSKRKMIMSMNLLMKKGKVLRKSLSKFMSSRNCHNHHSSKNYGGRFMVHDYEFSCSNSPNPLFINKLKRNHHFTFPCINAPEVIDEEILPCQYLLSPLKFEIENVSKGSMTMVPKTPEYTLDFRFDASEEGESPLLSPFSVRISNYSTLEENEEIENSQVDDEAEDFIRRFYEQLRMQNGLQNCPNFKK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1092 216 PANTHER OS01G0930500 PROTEIN 1 209 - -
Tpr6g1092 216 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 209 - -
Tpr6g1092 216 Pfam Cotton fibre expressed protein 186 205 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1092 Tpr-Chr6 10420410 10421060 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1092 - - gmx:100790324 249.21