Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1090 ATGGAACCACCACCATCATCACCAAGTTTCATACACATAAAACTAATTTCCTGCAAAAACATAACCGCCTTCAACTTCTTCCAAAAACTAACTCTCTACTCACAAGTCTCAATTTCAACCACAAACCCCAAAACAAATCTCACCGAAGACCAAAAACAACGACAAAAAACACCAACCGACAGAGACACCGACGATGACGGAACAAACCCTGAATGGAACCAACAAACTCGTTTCGATTTATCTTTCCTCTCTCAACATTCAGATCCAACTGAATTCTTCTTATCATTTGAGTTTCGACACGATGGTATAATCCTCGGTGACAAGATCCTCGGAGAATGTCGTGTTCCGTTAACCGATCTGATTCGTGATGTTGACGGCGTCGAGAGATTCGTTTGTTACGAGATCCGTTCCGCTGAAGGGAAACCGAATGGGATCTTCAATTTTTCGTATAGATTGGAAGGAATTCGGAATGGGAATGGGAATGGAATCTATTCGTCTCAGATTCTCGATGGGAGAATCTCCGGTTACCCTGTTCTTACGCCGGAGGATTGTGCTCCGGTGAAATTTCCAATATCGGAAATTGAGAGACCGTGTTGTTATCCCACGGTTGGTTATGTTCATGAGGGAACGTTTGCGATGGCGTCTCCGCCGTCTATTTCATATCCATCGACTGGAGAATATAATTGTTGTTATCCACCGGTTCAGCCGTCGGTGTATCCGTATCCTCCGCCACCTCCGCCTCCTGCGGCGGAGCGGATTTACCCGCCTATTGGGCCTGAGGCCCATTATTGGCAATCTGGCCCGTATTTTGAAAACAGGTGGTAA 825 0.457 MEPPPSSPSFIHIKLISCKNITAFNFFQKLTLYSQVSISTTNPKTNLTEDQKQRQKTPTDRDTDDDGTNPEWNQQTRFDLSFLSQHSDPTEFFLSFEFRHDGIILGDKILGECRVPLTDLIRDVDGVERFVCYEIRSAEGKPNGIFNFSYRLEGIRNGNGNGIYSSQILDGRISGYPVLTPEDCAPVKFPISEIERPCCYPTVGYVHEGTFAMASPPSISYPSTGEYNCCYPPVQPSVYPYPPPPPPPAAERIYPPIGPEAHYWQSGPYFENRW* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1090 274 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
Tpr6g1090 274 SMART C2_3c 10 129 IPR000008 -
Tpr6g1090 274 MobiDBLite consensus disorder prediction 44 70 - -
Tpr6g1090 274 CDD C2_SRC2_like 11 148 IPR044750 GO:0006952
Tpr6g1090 274 Pfam C2 domain 12 120 IPR000008 -
Tpr6g1090 274 MobiDBLite consensus disorder prediction 49 68 - -
Tpr6g1090 274 PANTHER INGRESSION PROTEIN FIC1 9 258 - -
Tpr6g1090 274 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 153 IPR035892 -
Tpr6g1090 274 Gene3D C2 domain 5 144 IPR035892 -
Tpr6g1090 274 PANTHER PROTEIN SRC2-LIKE 9 258 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1090 - K22733 gmx:106796391 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1090 6 10414177 10415001 Tpr6g1090 6 10414177 10415001 ECH