Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1084 ATGATCGCACCAATTCCAACGTCTCATTCCAATTCCAACCATCTTCTTCCTCCACTTTCCACTCTACATCAACACAATCATCAAAAAAGAAAAAGAGAACAAGAACAAGAACAAGTAAAAATGTGTCAAACATCACAACAACAAACCACAATTCCTCATTCCCCTTCACCCCAATTTCAATTTCATCCATCTACCCCTGAAAAATCCACTCATTTCTCTCCACCTCCATCACTTCTTCAACGAATGCAACGTGATAAATGCTTTTCCTGTAATCAAATAGGTCACTGGACTCAAAATTGTCCTAACAAAACCCCCAACAACAACAACAACAGTAAGAAACCCGATTCTGCTAACCAACAAATATGGTGTCGTTGCGGTTACGGTGTTTGTGGTTCCAAACAGTCTGGTACTGCAAAAAACTGTGGGAGGTGGTATTTTACTTGTCCTATAGAAAGGGGTGCACGTTGTAATTGGGTTAAATGGTGTGATGAACACATTCTTGAGAGTGATTTGCGGCCTCCTTTGTTGAAGTATCCTTTGTGTGATTGTGGAGCTGGTGTTTGTAGAAGAGTGGTGGAAACAGGACAGTGCTGCTATTTCGCTTGTCCTATTAAAAAGAGTCACGGCTCTTGTGGTTACCGCGTGTTGGAATATGAACTACTCAATAAAGCAAGAAATGATGAACCGGTTAATAATACAAGCGTCGTTCCTATCCAACAAAGCAGGCACAGAGATCTCAATGAATTTTTTGAAGGAGACCAAACTGACACATCTGTCATAAACCTGGATAATGACATGGCGGAGGGCAGTGATTTGCTATCAAAGAGGATGAGGTTAACGGACGGTTCTGAGAATTCTTCACCTGTTGCTGTATCTGAGATTCCAGAGGGAAAATGTGGAGGATCACCAATAGAGGTGGTGGTCATATCTGATATTCCAGAGGGAAAATGTGGAGGTTCACCAATAGTAATGGCCAATTCACAACCTGTCGATTTTCCAGAAATTAAGTTTGAGGATGATGATCTAGAAACGATAAACTTAGCCTCGTGGGATGCAATTGATGCCGAAGCTCGTCTTTCTTTTTCAACACCGTCAAGGATCAGTTGTCGACAGAGCGTATTTCAGAAGGACATTCTTTCTGCTGATGTATCATTTGGTATTAATAGTCAAAGTGAATGCAGAGATGTTGTGATCAAGAGTCCTAATCAAGGTACCCAACTTTCACCAGGAAGTGAAGTAAAACTAAAAGGCTTTTTGATAGAAGCACAAAAGCGACTTCTTGATGATCTGGAGAATCTGGATTTTGACCAGTATGAGTCTATGCGAGTGACCGCGGAAGCCACTTTTTTTCTGTTAAATTGTTCAGGATTTCAGTGTAAACAATTTTCTGACTATGTATGGGACTTCATCAATCTCGCAACGTCCTTGGCGGAAATTGACAAGTCCATGGAAAATTCACCTACTTTGGAGGAGTACAGTAAACTCTTGGAGGAAGAGAGACTGAAACTGGCCAACATCAAGGATGAGTGTACGAAGACTGAAGCTTTGCTCCAGTCCTCCAATCAGAAGAGAAAATTTCTTTCTGAAGAGGTCTCTCGTCTTGAGGCCGTGCTCCGTGAAAAACAAAATGAGTTGAAATTTTGTGATTTGGAGACAGTGAAGTTTGAGACCCGGCTGGGTGATGTAAAACGAAGAATGTTGGAGGCTGACGAAACCGTAGAAGATAGAATTCTACAAACCGAAGCAGCAAGGATAAAAGTTAAAGAGAGAGACACAAAGGAAATTGCAGCCAGGATAGCATTGAAGAATGCTAAACATGCTTTGGAAAACTAG 1833 0.4135 MIAPIPTSHSNSNHLLPPLSTLHQHNHQKRKREQEQEQVKMCQTSQQQTTIPHSPSPQFQFHPSTPEKSTHFSPPPSLLQRMQRDKCFSCNQIGHWTQNCPNKTPNNNNNSKKPDSANQQIWCRCGYGVCGSKQSGTAKNCGRWYFTCPIERGARCNWVKWCDEHILESDLRPPLLKYPLCDCGAGVCRRVVETGQCCYFACPIKKSHGSCGYRVLEYELLNKARNDEPVNNTSVVPIQQSRHRDLNEFFEGDQTDTSVINLDNDMAEGSDLLSKRMRLTDGSENSSPVAVSEIPEGKCGGSPIEVVVISDIPEGKCGGSPIVMANSQPVDFPEIKFEDDDLETINLASWDAIDAEARLSFSTPSRISCRQSVFQKDILSADVSFGINSQSECRDVVIKSPNQGTQLSPGSEVKLKGFLIEAQKRLLDDLENLDFDQYESMRVTAEATFFLLNCSGFQCKQFSDYVWDFINLATSLAEIDKSMENSPTLEEYSKLLEEERLKLANIKDECTKTEALLQSSNQKRKFLSEEVSRLEAVLREKQNELKFCDLETVKFETRLGDVKRRMLEADETVEDRILQTEAARIKVKERDTKEIAARIALKNAKHALEN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1084 610 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 53 610 - -
Tpr6g1084 610 SMART c2hcfinal6 86 102 IPR001878 GO:0003676|GO:0008270
Tpr6g1084 610 PANTHER OS07G0190500 PROTEIN 53 610 - -
Tpr6g1084 610 MobiDBLite consensus disorder prediction 39 76 - -
Tpr6g1084 610 ProSiteProfiles Zinc finger CCHC-type profile. 86 102 IPR001878 GO:0003676|GO:0008270
Tpr6g1084 610 MobiDBLite consensus disorder prediction 1 76 - -
Tpr6g1084 610 SUPERFAMILY Retrovirus zinc finger-like domains 81 108 IPR036875 GO:0003676|GO:0008270
Tpr6g1084 610 Coils Coil 489 551 - -
Tpr6g1084 610 MobiDBLite consensus disorder prediction 1 23 - -
Tpr6g1084 610 Gene3D - 67 116 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1084 - - cam:101489051 516.538