Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1076 ATGTCTTCTGTGCCAGCAAGAACGGGGCGACAAAGACAACGTTATGAAGACAACCTTCGACTTGTTTCTGGATGTATTCCGTATAGATGGAGAAAGGAGAATGCAGATCAAATTGGAAAAACCGAGGAAATGATAGAAGTACTTATGATTTCTTCGCCAAAACGTGACGACCTTGTATTTCCAAAGGGTGGCTGGGAGAATGATGAGACTGTTACAGAAGCCGCTTGTCGTGAAGCTTTAGAAGAAGCAGGAGTTAAAGGAATACTAAGAGAAACTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGCCAAGACTTGTGTGGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACCGAAGAACTCGAGCATTGGCCTGAGCAGAAAAACCGTGCTCGCCGATGGTTAAACATAAAGGAAGCATTTAGACTCAGCCGATATGATTGGATGTGTAATGCACTTGAGGAGTTTACTAAAGTTATGGCAGAAGACAGGAAGCTTGACAACCAAGACAATAATGTTGACCCCCCTTCCGTTCTCGTAACTGTTGACACCAAAATTATAATATTGGTAATATTCATTTCGACTTGGTGTTATAATTTGAATAGAAGAAAAACTCATTTCGATTAG 645 0.4202 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWRKENADQIGKTEEMIEVLMISSPKRDDLVFPKGGWENDETVTEAACREALEEAGVKGILRETPLGIWEFRSKSSQDLCGMEGGCRGYMFALEVTEELEHWPEQKNRARRWLNIKEAFRLSRYDWMCNALEEFTKVMAEDRKLDNQDNNVDPPSVLVTVDTKIIILVIFISTWCYNLNRRKTHFD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1076 214 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 188 - -
Tpr6g1076 214 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Tpr6g1076 214 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Tpr6g1076 214 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 188 - -
Tpr6g1076 214 SUPERFAMILY Nudix 17 174 IPR015797 -
Tpr6g1076 214 Pfam NUDIX domain 46 154 IPR000086 -
Tpr6g1076 214 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 166 - -
Tpr6g1076 214 CDD Nudix_Hydrolase_9 21 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1076 Tpr-Chr6 10175718 10180376 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1076 K07766 - gmx:100794003 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1076 6 10175718 10180376 Tpr6g1076 6 10175718 10180376 ECH