Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1039 ATGAGACAACACAAGCAATCACCATCAGCGAGACCGAAGATTCTATATCTGGTGTGTGCCGTTGCATTGTTCTCCCTTCTCCTCTTCTCCATTCAATCCTCTTTCTTCAACGGTTCATTCTATTCAGATCCTCGCACCTCCGAATCAATTCGCGAATTGTTTCAATTTCAGTCCACTGTTCAGCAATGTGTGGCTAATAGGGGGCTTGGACTCACTGCAGATATTATAGACCACTGCACATTGGTCCTTAAATACCCTGAAGGCACCAACAGCACTTGGTACAATCAGCAGTTTAAAAAATTTGAGCCTTTGGAGTACACATATGATGTGTGTGAGGCAATACTATTATGGGAACAGTATCGTAACATGACCACAGTGTTGACAAGGGAGTATCTTGACGTTCGTCCTGGTGGTTGGTTAGATTATGCTCCATTAAGGATAGCACAACTAGGGGCAAAGAAGTGCTATAATAAGACACTTTGTGAAGAGCAGCTTGAGATATTATTACCTGCAAAACCCCCCTTTCATCCAAGGCAGTTTCGTACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACAGAATTTGGGAATGAAATTGATAGTCATGATGCTGTTTTTAGAGACAATGAGGCCCCTGTTAATGAGAAATATGCCAAATACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTTCCGCTCGCAACATGGTTCCTATTCTAAAGGGGTCTGATGATGAGGTACTCATAATCAAAAGTCTGACACACAGAGAAATCAATACAGTTATAAAGACTCTACCAAATCCAGTCTATCTGTTTCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAATTAGCGCTGTCTATGTGTGATATTGTTGATATATATGGTTTCACTGTTGATCCTGGATACACTGAGTGGACAAGATACTTCTCTGCTCCTAGGAAAGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCCCCCATGAGATCCATGAGGAGGCAAGACTGGTCAGATGTGCCAAGTAGAGAAATGATAAGCCAAGCACATGCAGCAGCTTGGCACTTGAGAAAGAGTTCAGCTGATAAGGGTGGTAGTAAAGGACAGTTTGGCAATTGTAAGGTCTGGGGGAATGTCGACCCAGACAAAAGTGGACCTATCTCAGGATCACCAGACATGAGTGATGTCAGGAAGTATTCAAATTATAAAAAATGGGAAGTCATGCCTTTGAAAAGTTTGAGGAAAGAAGCACAGCTTCACTATAAGCAGATGGAAGGGGTCTCTCAATATAAAATGGATGGCAATAAGTTGGATGATCTAGTGTGTGTGAGACACTCCTTAAAATCTGCGGTGTAA 1425 0.4239 MRQHKQSPSARPKILYLVCAVALFSLLLFSIQSSFFNGSFYSDPRTSESIRELFQFQSTVQQCVANRGLGLTADIIDHCTLVLKYPEGTNSTWYNQQFKKFEPLEYTYDVCEAILLWEQYRNMTTVLTREYLDVRPGGWLDYAPLRIAQLGAKKCYNKTLCEEQLEILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGNEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGSARNMVPILKGSDDEVLIIKSLTHREINTVIKTLPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSAPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSMRRQDWSDVPSREMISQAHAAAWHLRKSSADKGGSKGQFGNCKVWGNVDPDKSGPISGSPDMSDVRKYSNYKKWEVMPLKSLRKEAQLHYKQMEGVSQYKMDGNKLDDLVCVRHSLKSAV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1039 474 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 1 472 IPR044782 GO:0008373|GO:0009846|GO:0009860
Tpr6g1039 474 Gene3D Glycosyl transferase family 29 146 275 IPR038578 -
Tpr6g1039 474 Gene3D Glycosyl transferase family 29 276 351 IPR038578 -
Tpr6g1039 474 Pfam Glycosyltransferase family 29 (sialyltransferase) 168 238 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1039 Tpr-Chr6 9708356 9714447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1039 59 345 Glycosyltransferase AT1G08660 85.017 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1039 - - gmx:100527382 818.535