Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1038 ATGCAGACAGCTCTAACCTTTGCAACCACTACCTTTGTGCCTTTGACAACATCAAAGAGTGTCTCACCTCTTACAACTAGTTTCCCTACCAAATTGATTGCCTCACCCTCACGTGGCTCTCCACCTCGTTACACTGCAATCAAAGTTGCAAAAGACAACTCTGAACCTTCAACAGTCAATTACAACTCTGCATTCTCAGTGTTTCCAGCTGAGGCATGTGAAACAGTTGGAGGAGATGCCTGTTTAGCAGACATGTATCCTGAAGTGAAGCTGCAACCTGAAGCAAAGAAGGACACACCAAAAGCTGCAACTTCAGAGAACACTGAGAGAGAGTATCTTGAATATAGTGACCCTAAAACGGTTTTCCAAGCAGAGGCTTGTGATGATCTTGGAGGAGCTTTCTGTGAGCCTGATTATCAAAAGGGTGTCTACTAG 435 0.446 MQTALTFATTTFVPLTTSKSVSPLTTSFPTKLIASPSRGSPPRYTAIKVAKDNSEPSTVNYNSAFSVFPAEACETVGGDACLADMYPEVKLQPEAKKDTPKAATSENTEREYLEYSDPKTVFQAEACDDLGGAFCEPDYQKGVY* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1038 144 MobiDBLite consensus disorder prediction 93 112 - -
Tpr6g1038 144 PANTHER LIGHT-REGULATED PROTEIN 1 144 - -
Tpr6g1038 144 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 144 IPR009856 GO:0009507
Tpr6g1038 144 Pfam Light regulated protein Lir1 1 136 IPR009856 GO:0009507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1038 - - mtr:MTR_7g084000 237.269