Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1005 ATGAACAACAACAATAACAACCAATCACTTGATCATGAAAATCCATTTGCAACACCAACACCACCGCCATCATCATCATCATCACAAAATCCTGCTACAACAACTGAGAATTGGGGAACACACATGATGGGAGCACCAGCTGTACCAAGTAGTCATCCAGACAACAAAAAAGCAGCTTTACAAACTCCTTCTACTCATGAACAACAACAACAGTCTCAGGTTCAATATTATCAACAAGATCATCCTTATGTTCAACACAGTCCTGTTCAAAAACCTAGCAATAGTCCCATGGAATCAATTCTTCATATGTTTGATTCTTGGAGTAAAAAAGCTGAAGCCACCGCCAACAACGTCTGGCACAATCTTAAAACAGGCCCTTCAGTATCTTCAGCTGCAATGGGAAAGATGAATCTTACTGTAAAAGCAATATCAGAGGGTGGATTTGAGTCACTTTACAAACAAATATTCACTACCTATCCAAATGAGAAGCTGAAGAAGACATTTGCTTGTTACCTTTCAACAACAACAGGGCCTGTTGCAGGAACCCTTTACTTGTCTAATATTCATATAGCATTTTGCAGTGATCGCCCCTTGAGTTTCACTGCACCCTCAGGCCAAGAGACTTGGAGCTACTACAAGGTAATGGTGCCTTTGGGGAAGATTGGAACAGTTAATCCTGTGATCATGAGGGAGAATCAATCAGAGAAGTATATCCAGATTGTGACAGTTGATGGGCATGATTTCTGGTTCATGGGTTTTGTTAATTATGACAAAGCAGTAAAGAACCTATCAGAAGGTGTCTCACATTTTGTTGTACCAGGTGTAGCTGTACCATCAAGTAACTAG 846 0.4043 MNNNNNNQSLDHENPFATPTPPPSSSSSQNPATTTENWGTHMMGAPAVPSSHPDNKKAALQTPSTHEQQQQSQVQYYQQDHPYVQHSPVQKPSNSPMESILHMFDSWSKKAEATANNVWHNLKTGPSVSSAAMGKMNLTVKAISEGGFESLYKQIFTTYPNEKLKKTFACYLSTTTGPVAGTLYLSNIHIAFCSDRPLSFTAPSGQETWSYYKVMVPLGKIGTVNPVIMRENQSEKYIQIVTVDGHDFWFMGFVNYDKAVKNLSEGVSHFVVPGVAVPSSN* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1005 281 MobiDBLite consensus disorder prediction 1 15 - -
Tpr6g1005 281 Gene3D - 148 268 IPR011993 -
Tpr6g1005 281 MobiDBLite consensus disorder prediction 55 76 - -
Tpr6g1005 281 PANTHER GEM-LIKE PROTEIN 5 15 275 - -
Tpr6g1005 281 PANTHER GEM-LIKE PROTEIN 2 15 275 IPR037848 -
Tpr6g1005 281 SMART gram2001c 150 228 IPR004182 -
Tpr6g1005 281 MobiDBLite consensus disorder prediction 1 76 - -
Tpr6g1005 281 Pfam GRAM domain 153 263 IPR004182 -
Tpr6g1005 281 CDD PH-GRAM_GEM 161 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1005 Tpr-Chr6 9225995 9228877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1005 - - cam:101505091 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1005 6 9225995 9228877 Tpr6g1005 6 9225995 9228877 ECH