Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0951 ATGTTCCTAAGGACACTATCATTTCAATCCATACAAAAAAAACCAATCCAAAACCATCATATAAACCTCATTTTCTTCACTCATTCATTCAACTACACTTCACAAAACGTTGCACAAAGGATGAGAGTTTTTGTTATCCTCGGTTCTTCCATCATCACTCCTCCTCCCAACCCACAACCACCATCTTCATCATCATCTTCTTCCACTCCACAACACCGTCATACAATCAAACCCCACAAAACCTCTCTTCAAAAGTTCCCTCCTTTATCTCCCAAGAACACTTCCACTACTCTTCTTCAAACCCCTCTTTTTCTCAAAGAATTTGAAACTGTTGATTCTGATGTGGATGCTGAACTCTTAGCTAATGCTGTTCTTATGGGTATTAAAGACAGAAATGTTAGGACTGTGATTGATGCTTTGAATAAAGTGGAGGAGGGTCTTGGTGAAGTTTCTTTGTCTACTCATCTTCATGCTTCTACCATTGCAAATGAGTGTTGTCATATGGTTTCATGTGGTCACATTGAAGAAGCTGTTGAATTGATGGAGGTTCTCTCACGTTTCCAGTTATCAATTGCACAACTTGTTCGGCCATCTTACATTATAAAAAGATGTGTTCTTAGTCGTAAACCAACTTTAGCTGTGAGGTATGCGTCCCTTCTTCCAAAGGCGCACATATTATTTTGCAACATCATATCTGAATTTGGCAAAAGTAGGGATTTAGCTTCTGCTCTGAAAGCTTATGATGCAATGAAGAAGAAATTGGAAAGACCCAATATGTACATATACCGGGCAATAATTGACACTTGTGGTCTCTGTGGCGATTTCATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGGAAATCACTCCAAATATATATGTGTTCAACAGTCTCATGAATGCGAATGCCCATGATTTCAACTACTCGTTAAATCTATATCAGAATATGCAGAAGCTAGGCCTGAAACCAGATATGGCATCCTATAACATCCTACTGAAATCATGCTGTGTTGCTGGAAGAGTTGACTTGGCCCAAGACATGTATAAGGAACTCAAGCATTTGGAATCAGTGGGACATCTTAAATTAGATGTTTTTACCTACAGCACAATTATAAAGGTTTTTGCAGATGCAAAATTGTGGCAAATGGCTCTAAGAATCAAGCGTGACATGCAGTCTGCTGGTGTTTCTCTTAATACTGTTGCATGGTCATCATTAATCAGTGCATGTGCGCATGCAGGGCTTGTAGAGCAGACAATTCAGTTATTTGAAGAAATGCTGTCGGCAGGCTGTGAACCTAATACACAGTGTTTCAACATCATTTTACATGCATGCGTTGAAGGCTGCCAATATGACAGGGCTTTTCGGTTTTTCAATTCTTGGAAGGGAAATAAGATGCTAGTGTCCTCTGGTGAAAACTACAATAGTAATTCAGAGCAGGGAGATATGGATAATGTTACCACATTGCCAAAAGGCATTTCTAGTTCACATATCTTGAATTTTACTGAGAGGTTCCCTTTCAAACCAACTACGTCAACATACAATATTTTACTGAAGGCCTGTGGTACTAATTACTATCATGCAAAAGCGTTAATCAACGAGATGAGAACAGTAGGTCTTTCCCCTAATCAAATAAGCTGGTCTATTTTGATAGATATATGCGGAGGATCAGAAAATGTGGAGGGTGCCATGGAGATTTTGAGAACCATGGTGGATTCTGGAATTAAACCTGATGTTGTTGCATATACAACAGCCATTAAGGTTTGTGTTGAAAGTAAGAATTTTACGCAAGCATTAAAATTATATGAAGAAATGAAAAGCTACGGAACACATCCAAATTTGGTGACATATAATACACTTCTAAGGGCACGCAGTAAATACGGATCCTTACGTGAAGTGCAACAGTGCTTGGTTGTATATCAGGATATGCGAAAGGCGGGGTACAAAGCCAATGACTACTATCTGGAGGGGCTGATTGAGGAGTGGTGTGAAGGAGTAATACAAGACAACGAAGATTACAAAGGAGAATATTCTACCAGCAAGACATCTGAAATAGAGAGACCTCAGAGTATACTTCTTGAAACAATTGCGGCACATCTATTAAAGAGAGTAGCTGACATCTTGGCAATTGATGTTCAAGGACTCACAAAGGTTGAAGCTCGCTTGGTCATTCTTGCAGTTCTTCGAATGATCAAAGAGAACTATGCTATTGGGCATTCGGTGAATGATGACATATTGATCATCATAGGAGCTACCAAAGCCGATGAAAGTCCATCCAAAAACATATTAGAAGTGCAAGAGGCCATGATGAAACTTCTTAGAAATGAATTGGGACTTGAGGTTATTCCAGCCAGAACCAGATTTGCACCAAGTGACACACCAAAGTTAAGGACCCCAAAACTTTCAAATCAAACCATAGAAGCACTGCCAGGAGAGAATGCATTAACCACAACAATGGGGTTTCACACAAGGAGACCTGCAGTTCTGCAAAGACTGAAGGTCACCAAAAAATCACTACACCATTGGTTGCAGAGGAAAGTTTTGGACAACCTCTTTAATGTTTTTCAGAGTTGA 2577 0.3943 MFLRTLSFQSIQKKPIQNHHINLIFFTHSFNYTSQNVAQRMRVFVILGSSIITPPPNPQPPSSSSSSSTPQHRHTIKPHKTSLQKFPPLSPKNTSTTLLQTPLFLKEFETVDSDVDAELLANAVLMGIKDRNVRTVIDALNKVEEGLGEVSLSTHLHASTIANECCHMVSCGHIEEAVELMEVLSRFQLSIAQLVRPSYIIKRCVLSRKPTLAVRYASLLPKAHILFCNIISEFGKSRDLASALKAYDAMKKKLERPNMYIYRAIIDTCGLCGDFMKSRYIYEDLLNQEITPNIYVFNSLMNANAHDFNYSLNLYQNMQKLGLKPDMASYNILLKSCCVAGRVDLAQDMYKELKHLESVGHLKLDVFTYSTIIKVFADAKLWQMALRIKRDMQSAGVSLNTVAWSSLISACAHAGLVEQTIQLFEEMLSAGCEPNTQCFNIILHACVEGCQYDRAFRFFNSWKGNKMLVSSGENYNSNSEQGDMDNVTTLPKGISSSHILNFTERFPFKPTTSTYNILLKACGTNYYHAKALINEMRTVGLSPNQISWSILIDICGGSENVEGAMEILRTMVDSGIKPDVVAYTTAIKVCVESKNFTQALKLYEEMKSYGTHPNLVTYNTLLRARSKYGSLREVQQCLVVYQDMRKAGYKANDYYLEGLIEEWCEGVIQDNEDYKGEYSTSKTSEIERPQSILLETIAAHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAIGHSVNDDILIIIGATKADESPSKNILEVQEAMMKLLRNELGLEVIPARTRFAPSDTPKLRTPKLSNQTIEALPGENALTTTMGFHTRRPAVLQRLKVTKKSLHHWLQRKVLDNLFNVFQS* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Tpr6g0951 858 TIGRFAM PPR: pentatricopeptide repeat domain 329 354 IPR002885 -
Tpr6g0951 858 TIGRFAM PPR: pentatricopeptide repeat domain 402 436 IPR002885 -
Tpr6g0951 858 TIGRFAM PPR: pentatricopeptide repeat domain 546 580 IPR002885 -
Tpr6g0951 858 TIGRFAM PPR: pentatricopeptide repeat domain 367 400 IPR002885 -
Tpr6g0951 858 TIGRFAM PPR: pentatricopeptide repeat domain 581 614 IPR002885 -
Tpr6g0951 858 Gene3D Tetratricopeptide repeat domain 495 691 IPR011990 GO:0005515
Tpr6g0951 858 Gene3D Tetratricopeptide repeat domain 358 492 IPR011990 GO:0005515
Tpr6g0951 858 Gene3D Tetratricopeptide repeat domain 225 357 IPR011990 GO:0005515
Tpr6g0951 858 Pfam PPR repeat family 400 446 IPR002885 -
Tpr6g0951 858 Pfam Pentatricopeptide repeat domain 508 557 IPR002885 -
Tpr6g0951 858 Pfam Pentatricopeptide repeat domain 567 624 IPR002885 -
Tpr6g0951 858 Pfam Pentacotripeptide-repeat region of PRORP 233 353 IPR033443 -
Tpr6g0951 858 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 112 842 - -
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 614 651 IPR002885 -
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 579 613 IPR002885 -
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 326 356 IPR002885 -
Tpr6g0951 858 MobiDBLite consensus disorder prediction 55 91 - -
Tpr6g0951 858 PANTHER OS03G0284900 PROTEIN 112 842 - -
Tpr6g0951 858 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Tpr6g0951 858 Pfam PPR repeat 367 397 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0951 Tpr-Chr6 8382970 8390848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0951 273 672 Glycosyltransferase AT1G05670 22.727 7.11e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0951 - - gmx:100794606 1180.62