Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0933 ATGGGTTCATTAGAAAGGTCAAAGAAAAAAACTCATTTATGGAAAAAAGCAATGCTTCATTTTTCTCTATGTTTTGTGATGGGTTTTTTTACAGGTTTAGCTCCATCAGGTAAATCTTTAATTTTTCCTAGCAAAATTGAAATTTTAGCTTCAAATGTAACAAAATTTGTAGCACCTCAACCTTCTCAAATTTCAACAAAAAATGTTAACAAAAGTTGGATAGCATCAGCACCACAAATTCATAGCCAAAAAACAAAAGCAACAACAACTAAATTGCATGTAAAATTATTACCTCAATTGAAGCCTAAAAGACTTGTAATCATAGTAACACCAACAAGCACAAAATTACCTTATCAAAATGTTTTTTTAAGAAGGTTGGCAAATACTATTAAGCTTGTTGATCAACCATTGCTTTGGATTGTTGTCGAAGCGAAAACCGATTCGACGGAATTGCCGGAAATATTAAGGAAAACTGGTATTATGTATAGACATGTGGTTTATAGTGAAGAATTTATGGACTTAGAAGATGAATTGAATCATCAGAGAAATTTAGCACTTGGTCACATTGAACATCATAGATTGAGTGGAATTGTTCACTTTGCTGGTCTTTCTAATGTTTATGATCTTCAATTCTTTCAACAGCTTAGAGATATTGAGGTCTTTGGGACATGGCCAACAGCACTATTACTTGCAAACAGAAAAAGAGTGATAATTGAAGGACCTGTATGTGACTCATCTAAAGTCATTGGATGGCATTTAAGGATTATGAACAATGAGACAATTACTTCTCCCATTCATATCTCAAGTTTTGCATTCAATAGCTCTATTCTTTGGGACCCTGAGAGATGGGGCCGCACTTCCTCAGTTAAAGACACTTCTCAGAATTCAATCAAGTTTGTGAAGCAAGTAGTACTAGAAGATGAGGCTAAGTTGAAGGGAATTCCACCAGATGATTGCTCCAAAATCTTGCTATGGCGTTTCAACTTTTTTTATGCACGCATCATTTCCAAGCACTAA 1017 0.3441 MGSLERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPSGKSLIFPSKIEILASNVTKFVAPQPSQISTKNVNKSWIASAPQIHSQKTKATTTKLHVKLLPQLKPKRLVIIVTPTSTKLPYQNVFLRRLANTIKLVDQPLLWIVVEAKTDSTELPEILRKTGIMYRHVVYSEEFMDLEDELNHQRNLALGHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTALLLANRKRVIIEGPVCDSSKVIGWHLRIMNNETITSPIHISSFAFNSSILWDPERWGRTSSVKDTSQNSIKFVKQVVLEDEAKLKGIPPDDCSKILLWRFNFFYARIISKH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0933 338 Pfam Glycosyltransferase family 43 126 328 IPR005027 GO:0015018|GO:0016020
Tpr6g0933 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 103 335 IPR029044 -
Tpr6g0933 338 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 331 - -
Tpr6g0933 338 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 331 IPR005027 GO:0015018|GO:0016020
Tpr6g0933 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 330 IPR029044 -
Tpr6g0933 338 CDD GlcAT-I 104 329 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0933 Tpr-Chr6 8246228 8249280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0933 1 329 Glycosyltransferase AT2G37090 61.337 2.51e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0933 K20869 - gmx:100785607 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0933 6 8246228 8249280 Tpr6g0933 6 8246228 8249280 ECH