Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0917 ATGGCAAAGCTATTCAATTTTCTTCCTCTTTTCTTTCTCAACATATTCATCATTGTTACATTGTTCGAAACAATTTCAGCTCAAACAGCTACAGCTCCAGCACCAGCAGGACCATTAAACATAACACAAGTCCTAGAAAAAGCAGGACAATTCACAACATTCATTAAACTACTCAAAGCGACACAAGTATCCGATCGAATCAATTCGCAACTCAATAACTCAAATCAAGGCCTAACAATCTTTGCACCAACAGATAATGCATTCTCAAGTCTAAAATCAGGAACATTGAACTCGATAAGCACACAAGATCAACTTCAACTTTTGCAGTTTCATATTTTACCAACACTTTACACAATCTCACAGTTTCAAACTGCTAGTAACCCTTTACATACACAAGCTGGAAACAGTGATGATGGAGAGTATCCTCTTAATGTTACTACTTCTGGAAATCAAGTTAATGTAACTACTGGTGTGATTGATACAACTGTTTCTAATACTATTTATAGTGATAATCAGCTTGCAGTTTATCAGGTTGATCAAGTGCTTCTTCCTATGGCACTTTTCGGACAAGCACCAACCGCTGCACCAGCTGAGGCTCCTGCGCCTACTAAGCCGGAGAAAAGTGTTCGGGCTTCTGGTGCTCCGAAAGGATCTCTGGATAGTCCGGCTGATGATTCAAGTGCTGTTGGTTATGCAGTTAATGGTGTTGCATTGTTTGTTGCCAATGTTGTTTTGTCTTGTTTGTGGATGTAA 753 0.3931 MAKLFNFLPLFFLNIFIIVTLFETISAQTATAPAPAGPLNITQVLEKAGQFTTFIKLLKATQVSDRINSQLNNSNQGLTIFAPTDNAFSSLKSGTLNSISTQDQLQLLQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVIDTTVSNTIYSDNQLAVYQVDQVLLPMALFGQAPTAAPAEAPAPTKPEKSVRASGAPKGSLDSPADDSSAVGYAVNGVALFVANVVLSCLWM* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0917 250 ProSiteProfiles FAS1/BIgH3 domain profile. 38 182 IPR000782 -
Tpr6g0917 250 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 244 IPR045003 -
Tpr6g0917 250 Gene3D FAS1 domain 19 185 IPR036378 -
Tpr6g0917 250 Pfam Fasciclin domain 50 184 IPR000782 -
Tpr6g0917 250 SUPERFAMILY FAS1 domain 36 184 IPR036378 -
Tpr6g0917 250 MobiDBLite consensus disorder prediction 196 223 - -
Tpr6g0917 250 SMART fasc_3 79 185 IPR000782 -
Tpr6g0917 250 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 12 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0917 Tpr-Chr6 8107528 8108505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0917 - - mtr:MTR_7g101080 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0917 6 8107528 8108505 Tpr6g0917 6 8107528 8108505 ECH