Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0909 ATGGACACACGCAGTGTTGTTGAGATAAAACATTCAAAGTTCAAAAGAATTTGTGTTTTCTGTGGTAGTAGTCCTGGCAAAAAAACTACTTACCAAGATGCTGCCATTCAACTTGGCAATGAATTGGTTTCAAGGAACATTGATCTTGTGTATGGAGGTGGGAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGTGTTATTCCCAAGACACTCATGCCTAGAGAGCTAACTGGTGAAACAGTAGGAGAAGTAAAAGCTGTTGCTGATATGCATCAAAGAAAAGCTGAAATGGCTAAGCATTCAGATGCTTTCATTGCTTTACCAGGTGGATATGGTACTCTTGAGGAGCTTCTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCGGTTGGATTAGTAAATGTCGATGGATACTTTAACTCGTTGTTGTCATTCATTGACAAAGCTGTGGAAGAAGGATTTATTAGTCAAAATGCTCGCCACATTATTGTATCAGCACCAACTGCAAAGGAGTTAGTCAAGAATTTGGAGGATTATGTTCCATGTCATGAGGGTGTTGCTTCAAAGTTGAGCTGGCAGATGGAACAGCAGCTAGCATACCCTCAAGATTATGACATCTCAAGGTAG 666 0.4099 MDTRSVVEIKHSKFKRICVFCGSSPGKKTTYQDAAIQLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISQNARHIIVSAPTAKELVKNLEDYVPCHEGVASKLSWQMEQQLAYPQDYDISR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0909 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 221 - -
Tpr6g0909 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Tpr6g0909 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Tpr6g0909 221 Gene3D - 5 191 - -
Tpr6g0909 221 TIGRFAM TIGR00730: TIGR00730 family protein 15 192 IPR005269 GO:0009691|GO:0016787
Tpr6g0909 221 PANTHER LOG FAMILY PROTEIN YJL055W 7 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0909 Tpr-Chr6 8005290 8009844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0909 K22522 - gmx:100787375 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0909 6 8005290 8009844 Tpr6g0909 6 8005290 8009844 ECH