Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0889 ATGGATGTTACAAAGAAGTTGAAGCTTAAGTCTTTGATATCAAAGGTGTTAAAGGGTCTTCAATTTTTGAAAATTAGTAAAGCATATAGAAGAAGAGGTAATTATGTGAGAATCATAGACATTGATGATGGTGATGAAAATGCAACAACTCAAGTGCCACAAGGTTATTTTGCGGTTATAGCAATGAAAGGTGAAGAACCAATGAGATTTGTTCTTGAGTTGGAATATTTAAGGGATTATCATTTCATGAAATTATTGGAACAAGCTAAGGAAGAATTTGGATATGAACAAAAGGGTGCTCTTGCATTGCCATGTAAGCCTCAAGATCTTCAAAAGATTATAGAGAATCGACATAATACAACTTTGTAA 369 0.3279 MDVTKKLKLKSLISKVLKGLQFLKISKAYRRRGNYVRIIDIDDGDENATTQVPQGYFAVIAMKGEEPMRFVLELEYLRDYHFMKLLEQAKEEFGYEQKGALALPCKPQDLQKIIENRHNTTL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0889 122 PANTHER F8A24.8 PROTEIN 8 119 - -
Tpr6g0889 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 119 IPR003676 GO:0009733
Tpr6g0889 122 Pfam Auxin responsive protein 37 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0889 Tpr-Chr6 7769559 7770146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0889 10 106 Calmodulin-binding Proteins AT5G20810 35.849 1.88e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0889 - K14488 gmx:102661602 118.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0889 6 7769559 7770146 Tpr1g4130 1 47586414 47586740 PCT